Gene Pnap_3955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3955 
Symbol 
ID4687888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4219796 
End bp4220302 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content67% 
IMG OID639836972 
Productregulatory protein RecX 
Protein accessionYP_984171 
Protein GI121606842 
COG category[R] General function prediction only 
COG ID[COG2137] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.318478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.130991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGT TCCGCTCATC CGGGAACTGC GCGGTGAGTG AAGCCAAACC TGCCTCCCGG 
GCAGGCTTTG GCCTGTCGCT CAAGGGCCGC GCCTTGCGCT ATCTGGCGGC CCGGGAGCAT
TCAAGGGCCG AACTGGAGCG CAAGCTAAAA CCGCATGAGG AAACGTCGGG CCAGCTGGCG
CAGGTGCTCG ACGAGTTGCA GGCCAAGGAT TTCATCAGCG AGGCGCGGGT GGTCGAATCC
GTGATCAACC GCCGCGCCGC GCGCTTCGGC GCTTCGCGCA TCAAGTACGA ATTGCTGAAC
AAGGGGCTGG GCGCAGAGGC TGTCGCCGAA GCGGTGAACA GCCTCAAGGG CAGCGAACTC
GAACGCGCGC AGGGCATCTG GCGCAGGAAA TTCGACGGGC CGGCGCTGGA CGCGGCCGGC
CGGGCCAAGC AGATGCGCTT CCTGGCCGCG CGGGGTTTTG GCGGCGACGT GATTCGCCGC
GTGGTGTCGC AGGCGGAGGA GGATTGA
 
Protein sequence
MAQFRSSGNC AVSEAKPASR AGFGLSLKGR ALRYLAAREH SRAELERKLK PHEETSGQLA 
QVLDELQAKD FISEARVVES VINRRAARFG ASRIKYELLN KGLGAEAVAE AVNSLKGSEL
ERAQGIWRRK FDGPALDAAG RAKQMRFLAA RGFGGDVIRR VVSQAEED