| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3950 |
|---|
| Symbol | |
|---|
| ID | 4688120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 4214710 |
|---|
| End bp | 4215495 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639836967 |
|---|
| Product | protein phosphatase 2C domain-containing protein |
|---|
| Protein accession | YP_984166 |
|---|
| Protein GI | 121606837 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0631] Serine/threonine protein phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0256176 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTACG AAATTTTCGC TCAAACGGAT CAGGGCCGGG TACGCCAAAA CAATGAAGAC
GCTGTCGCGT TTGATCCGCA GACGGGTTTG TGCCTGCTGG CCGACGGGAT GGGCGGCTAC
AACGCGGGCG AGATTGCCAG CGGCATGGCC GTCACCTTCA TCAAGCAGGA ACTGGGCTCC
TGGCTGCTAC AGGCCGGCAA CCGTGCCTCT GCCAGGGAAC TGCGCCGGAC CCTGGAAACC
TGCGTACACA ACGTCAATCA CTCGATTTTC AGTGCAGCCT GTTCCAACCC CGACTATGAG
GGCATGGGCA CCACGCTGGT GGCGGGTGTT TTTGTCGAAG GCCGACTGGT CCTGGGTCAT
GTCGGTGATT CCCGCTGCTA TCGCCTGCGC GGCCAGGCCT TTCAACAAAT CACCAAGGAC
CATTCGCTGC TGCAGGAGCA GATCGACGCT GGATTGATGA CGCCCGAGCA GGCCCTGACG
TCACCCTACA AGAATTTGAT CACGCGCGCC CTGGGAGTCG AAGATTCGGT CCTGATTGAC
ATCAACGAAT ACCGGGTAGA ACTGGGTGAT GTGTACCTGA TGTGCTCGGA CGGCCTGTCG
GACATGGTCC CGGATGGGAT CCTGGCCGCA ATTTTGCATG CCTCCGGCAC ATTGCAGCAA
AAAGCCCTGA AACTGGTGCA CGCGGCCAAC GAAGGCGGCG GGCGCGACAA TATTTCTGTT
TTGCTGGTGC ACGCCACGGA AGACGAATCC AGGCGCGGCC TGCTGTCCAG AATGCTGGGA
AAATAG
|
|---|
| Protein sequence | MTYEIFAQTD QGRVRQNNED AVAFDPQTGL CLLADGMGGY NAGEIASGMA VTFIKQELGS
WLLQAGNRAS ARELRRTLET CVHNVNHSIF SAACSNPDYE GMGTTLVAGV FVEGRLVLGH
VGDSRCYRLR GQAFQQITKD HSLLQEQIDA GLMTPEQALT SPYKNLITRA LGVEDSVLID
INEYRVELGD VYLMCSDGLS DMVPDGILAA ILHASGTLQQ KALKLVHAAN EGGGRDNISV
LLVHATEDES RRGLLSRMLG K
|
|---|
| |