Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3950 |
Symbol | |
ID | 4688120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 4214710 |
End bp | 4215495 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639836967 |
Product | protein phosphatase 2C domain-containing protein |
Protein accession | YP_984166 |
Protein GI | 121606837 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0631] Serine/threonine protein phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0256176 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTACG AAATTTTCGC TCAAACGGAT CAGGGCCGGG TACGCCAAAA CAATGAAGAC GCTGTCGCGT TTGATCCGCA GACGGGTTTG TGCCTGCTGG CCGACGGGAT GGGCGGCTAC AACGCGGGCG AGATTGCCAG CGGCATGGCC GTCACCTTCA TCAAGCAGGA ACTGGGCTCC TGGCTGCTAC AGGCCGGCAA CCGTGCCTCT GCCAGGGAAC TGCGCCGGAC CCTGGAAACC TGCGTACACA ACGTCAATCA CTCGATTTTC AGTGCAGCCT GTTCCAACCC CGACTATGAG GGCATGGGCA CCACGCTGGT GGCGGGTGTT TTTGTCGAAG GCCGACTGGT CCTGGGTCAT GTCGGTGATT CCCGCTGCTA TCGCCTGCGC GGCCAGGCCT TTCAACAAAT CACCAAGGAC CATTCGCTGC TGCAGGAGCA GATCGACGCT GGATTGATGA CGCCCGAGCA GGCCCTGACG TCACCCTACA AGAATTTGAT CACGCGCGCC CTGGGAGTCG AAGATTCGGT CCTGATTGAC ATCAACGAAT ACCGGGTAGA ACTGGGTGAT GTGTACCTGA TGTGCTCGGA CGGCCTGTCG GACATGGTCC CGGATGGGAT CCTGGCCGCA ATTTTGCATG CCTCCGGCAC ATTGCAGCAA AAAGCCCTGA AACTGGTGCA CGCGGCCAAC GAAGGCGGCG GGCGCGACAA TATTTCTGTT TTGCTGGTGC ACGCCACGGA AGACGAATCC AGGCGCGGCC TGCTGTCCAG AATGCTGGGA AAATAG
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Protein sequence | MTYEIFAQTD QGRVRQNNED AVAFDPQTGL CLLADGMGGY NAGEIASGMA VTFIKQELGS WLLQAGNRAS ARELRRTLET CVHNVNHSIF SAACSNPDYE GMGTTLVAGV FVEGRLVLGH VGDSRCYRLR GQAFQQITKD HSLLQEQIDA GLMTPEQALT SPYKNLITRA LGVEDSVLID INEYRVELGD VYLMCSDGLS DMVPDGILAA ILHASGTLQQ KALKLVHAAN EGGGRDNISV LLVHATEDES RRGLLSRMLG K
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