Gene Pnap_3949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3949 
Symbol 
ID4688829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4214104 
End bp4214670 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content59% 
IMG OID639836966 
ProductFHA domain-containing protein 
Protein accessionYP_984165 
Protein GI121606836 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0228001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAAA TGATCATTTC CCTGGACGGT GTAGTCCTCA AGGAAGTCCA GTTGACCAAA 
GACCGGACCT CCTTGGGCCG CAGGCCGTAC AACGACATCG TTATCGACAA CATGGCCGTC
AGCGGCGAGC ATGCCGTTTT GCAGATGTCG GGCAACGAAG GCTACATTGA AGACCTCAAC
AGTACCAACG GTACCTATGT CAACGGCAAG ACGGTCAAGA AGCAGCAACT GCACCACGAC
GACATCGTCG AAATCGGCAA ATACAAAATT CAGTACGTCG ATGAAGCCAA TGCAGGCGCA
AGCGCTGTCA GTGGCGCCAT CCGCGTCATG TCGGGCGCCG CCGCCGGCCG TGAAATGGCC
CTGGTCAAGG CGGTGACCAC GCTTGGCAAG CCCGGCGTGG CCGTGGCCAC CATCACCAAA
GGCCCTAGGG GTTTTGTCAT TGCCCATGTG GACGGCGCCA GCCAGCCCAT GCTGAATGGC
GTGGCTGTGG GCATCGAAGC GGTTGCGCTC AGGGACGGCG ACAGGATTGA ACTGGCTGGG
GCGCAGATGC AGTTCGTGGT GCATTGA
 
Protein sequence
MPKMIISLDG VVLKEVQLTK DRTSLGRRPY NDIVIDNMAV SGEHAVLQMS GNEGYIEDLN 
STNGTYVNGK TVKKQQLHHD DIVEIGKYKI QYVDEANAGA SAVSGAIRVM SGAAAGREMA
LVKAVTTLGK PGVAVATITK GPRGFVIAHV DGASQPMLNG VAVGIEAVAL RDGDRIELAG
AQMQFVVH