| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3946 |
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| Symbol | |
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| ID | 4688833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4212231 |
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| End bp | 4212740 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639836964 |
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| Product | fimbrial protein pilin |
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| Protein accession | YP_984163 |
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| Protein GI | 121606834 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00129399 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCGTT CTATGCAAAT GGTTCAAAAG GGTTTCACCC TGATCGAATT GATGATCGTT
GTCGCGATCA TCGGTATTTT GGCTGCCGTG GCTTTGCCTG CGTATCAAGA TTACACCCAG
CGTGCTCAAG CGGGTGAAGC GTTCATTTTG ACGGATGGCG CCAAGACGCC GTGGTTGGAT
AATCTGGTTG GCACGACTTG TCCAAACAAT ACCGCTGCTG CTGCGGCAGG CACTCCCAAC
GCACTGCCAA TTTCTACGGC TATCAAGGGT AAATATGTGG CTAGTGTGCT TTTTGGCGGC
ACTGCAGTTA TTTCAGCGGT GGGCGATATT ACCGGTTGCA CGGCACTAAC TACTTTCAAC
AGCACCACCG CCGGTCCTGG TATTGCAGGC AAGGCAATTT ACTTTGATGT GGTCGCCAAT
AGCGCCACAG TTAACTTTAA CTGCAGAACA GCGACGGGTA ATGCATTGAC CACTACTCCC
GATAAGTTCT TGCCCAAGAC TTGCAGCTAA
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| Protein sequence | MKRSMQMVQK GFTLIELMIV VAIIGILAAV ALPAYQDYTQ RAQAGEAFIL TDGAKTPWLD
NLVGTTCPNN TAAAAAGTPN ALPISTAIKG KYVASVLFGG TAVISAVGDI TGCTALTTFN
STTAGPGIAG KAIYFDVVAN SATVNFNCRT ATGNALTTTP DKFLPKTCS
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