| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3944 |
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| Symbol | |
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| ID | 4688586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4210636 |
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| End bp | 4211136 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639836962 |
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| Product | fimbrial protein pilin |
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| Protein accession | YP_984161 |
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| Protein GI | 121606832 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.736158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00123211 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCATA CTTTTAAAAA AGGGTTCACT TTGATCGAGC TAATGATCGT TACGGCGATT
ATTGGAATTT TGGCAGTTGT AGCTTTGCCA GCATATCAAA ATTATATACA GCGGGCTCAA
GTTTCTGAGG CGATAACTTT AACGGATGGC GCAAAAACAG GTTGGTTGGA TAATTTGGAA
GGTACTACTT GCCCCAATAA TACAACAACA GCAGCTTTGG GTATTTCCAA TCCACTGCCA
ATTTTTAATG CAATCAAAGG TAAATATGTG AGTAGTGTTC TTTTTGCTGG AAGTGCAGTC
ATTACATCAA GTGGAGATAT TTTGGGTTGT ACAGCGCTAA CTACTTTTAA TACTACGACT
TCAGGTCTTG GTATTTCAGG TAAGGCCATT TATTTTGACA TCGTCGTTAG TAGTGCCTCT
GCTAGCTTTA ACTGCAAAAC AAGTACGAGT AATCCAGCAA CTACTGTTTC CGATAAATTA
CTACCAAAAA TTTGCACCTA A
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| Protein sequence | MKHTFKKGFT LIELMIVTAI IGILAVVALP AYQNYIQRAQ VSEAITLTDG AKTGWLDNLE
GTTCPNNTTT AALGISNPLP IFNAIKGKYV SSVLFAGSAV ITSSGDILGC TALTTFNTTT
SGLGISGKAI YFDIVVSSAS ASFNCKTSTS NPATTVSDKL LPKICT
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