Gene Pnap_3937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3937 
Symbol 
ID4688921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4201258 
End bp4201842 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content39% 
IMG OID639836955 
Producthypothetical protein 
Protein accessionYP_984154 
Protein GI121606825 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.147064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00164334 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAATATCA TTCAAGGAAC CGTTCTTGAA TCGTCCGAAT CATCTAATTC TATTGTTAGT 
TCGCATAGGG GTTTGTCGGA TGTCATAACC AACAGTTCGG GGACGTATAC GCCACCTCGT
ATTTCCACCC AAATTGTCAC GACAAGCAAG GTATGGTTAA AAAAACTCGA TGGAAAAGAT
GCTGAATTTA ATATGAGTGA TTTTTCAGTC CCTCTTCGTG TCGGGCATCA AATTGCAATT
ATTTATGGTG CAGCGGAAGG CATAGAAAAT GGTGCTTATT TTGGTGCTTT AAATAAGTCA
ACTGGAGAGT CAGCATTTGA CCCGTCTATA CATTGCAATC GACTCAAAGA ATTTGGACTT
TATATACCAA AGAATTATTA TAGAAATTGG TTTCTGCGTA GTTTTGTTAT TGGTGCCGTC
ATTGGGTTAT TACCATTTGT CGATTTTGCA TTAGGCATTT TCATTGGTGT CATTCTGACA
AACATTCTTG CGGTCATTCT TTGTGTTGTC AAGCAAGTGA AGGGGCAAAA CATGCTTCCA
GAACTTAACA AGCACGCTTT GCAAACGTTG CATTCTGCTG TTTGA
 
Protein sequence
MNIIQGTVLE SSESSNSIVS SHRGLSDVIT NSSGTYTPPR ISTQIVTTSK VWLKKLDGKD 
AEFNMSDFSV PLRVGHQIAI IYGAAEGIEN GAYFGALNKS TGESAFDPSI HCNRLKEFGL
YIPKNYYRNW FLRSFVIGAV IGLLPFVDFA LGIFIGVILT NILAVILCVV KQVKGQNMLP
ELNKHALQTL HSAV