Gene Pnap_3927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3927 
Symbol 
ID4689463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4191955 
End bp4192380 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content42% 
IMG OID639836945 
Producthypothetical protein 
Protein accessionYP_984144 
Protein GI121606815 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.546781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000686025 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCCAT CCCTCACTAT CCCAACTGAC AATATTTACA AGTTTTCTTG CCTGTTTGGG 
CTTGCACTGA TACTTGTATC CATCTTTTCT TTCGCATCGA ACTACACCAC GACCCTTGAT
CGAAAGGTCA GGTATAGCGA GTTAGTAATT GGTCTTGAAT CGAAAGCTCA ACGAAATAAG
TCCGAGGATG ATCTGTTGGC GCTAAACAAG AAGCTTCGCG AAATAGCGAT GGAAAATGAA
AAAGTCTTAA ATTTGCTACT TGGTGCAGTT ATTGCGATTG GATCTATTCT TAGCCTCTAC
GGCGCGGATA GGTGGCATAA AAAAATTCAG CAACGCGATG ACAAAATTGT GGAACTTCAA
ATCGAAAAGT TACAAATCGA AATTGCGAAT CTTCGGCGGT CAAATCAAAA TTCAAGCCGG
AGTTGA
 
Protein sequence
MTPSLTIPTD NIYKFSCLFG LALILVSIFS FASNYTTTLD RKVRYSELVI GLESKAQRNK 
SEDDLLALNK KLREIAMENE KVLNLLLGAV IAIGSILSLY GADRWHKKIQ QRDDKIVELQ
IEKLQIEIAN LRRSNQNSSR S