| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3921 |
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| Symbol | |
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| ID | 4689609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4184382 |
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| End bp | 4185365 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639836939 |
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| Product | phage integrase family protein |
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| Protein accession | YP_984138 |
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| Protein GI | 121606809 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.470105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00183347 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAACTT TTCGCAAACG CGGCAATGGC TGGCAAGTAC GTGTAAGGCG TCTTGGATAC
CCTGATGAAG TCAAGACATT TCCCATCAAG TTAGATGCTG AACAATGGGC ACGATCTATT
GAATCCGATA TGGATCGTGG CCCGTTTGTC AGTAGAAACA TTGCTGAGCA AACCAGTTTT
GGCGATGTCA TGCGTCGATA CATGAAGGAA ATCACTCCGG GAAAACGTGG CTGTCTTGAA
GAAACCATCC GGTTGACAGC CACACTTCGA CTGAAAATTT CGAAATTCAG CATGGTCAAT
CTCACACCTG AAGTCTTGGC AGAGTATCGG GATGAACGTC TAAAAAGTTG TCAACCAAGC
ACGGTAGTTC GTGATTTGGC TGTACTGTCT TCCATCATCA ATCATGCAAG GCGTGAATGG
AGATTTCCCA TTCAGAACCC GATTGAAATG ATCCGCAAGC CCACCATGCC GCCGGGGCGT
GACCGGGTTC TGAGTCGAAC CGATGAGGTG ACCCTGCTGA CGGAACTGTT GCCTACAGGG
CGTCGTAACC CGTTGATGCA ACCCATAGTG GTCATAGCCA TCGAAACTGC AATGCGGCGC
GGTGAAATCT TAGGTCTGCG ATGGGAGCAT GTCGATCTGG ATCAGCAAAC GGTCTTCCTG
CCAATTACCA AGAATGGGAA GTCTCGTTAC GTACCACTCT CCAAACGCGC TGTCGAAACC
CTGCGAACAG TAGATCGTTC AATCGATGGT CGAGTGTTTC CAATTGGAAT GGCAGCCATG
GAAGCAAATT TTCTGAAGGC AGTGCGACGT GGTAACTTGG GAGATTTGCA TTTCCACGAT
CTACGCCACA CTGGGACCAG TCGGATGGCG AACAAATTGC CAAATGTGAT CGAACTGGCT
GCTGTCACTG GCCACACTTC CCTTCAAATG CTGAAGCGGT ACTACCATCC AAAAGCTCAT
GACTTGGCGA TGAAGTTAGG ATGA
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| Protein sequence | MATFRKRGNG WQVRVRRLGY PDEVKTFPIK LDAEQWARSI ESDMDRGPFV SRNIAEQTSF
GDVMRRYMKE ITPGKRGCLE ETIRLTATLR LKISKFSMVN LTPEVLAEYR DERLKSCQPS
TVVRDLAVLS SIINHARREW RFPIQNPIEM IRKPTMPPGR DRVLSRTDEV TLLTELLPTG
RRNPLMQPIV VIAIETAMRR GEILGLRWEH VDLDQQTVFL PITKNGKSRY VPLSKRAVET
LRTVDRSIDG RVFPIGMAAM EANFLKAVRR GNLGDLHFHD LRHTGTSRMA NKLPNVIELA
AVTGHTSLQM LKRYYHPKAH DLAMKLG
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