Gene Pnap_3912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3912 
Symbol 
ID4690078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4176514 
End bp4177083 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content63% 
IMG OID639836930 
Productglutathione peroxidase 
Protein accessionYP_984129 
Protein GI121606800 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.295477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0278841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTTGGG CGCTCATTGC CAGCGCTGCG CTGGCCGCCA CTTTCCCCGC AGGCGCGGCC 
AGCCTTGACG CGCCGTCCAC GCCGCCGTCC TGCCCCGCGC TTTTGCAACA AAACGTGCTG
CGCCTGCAGG ATGAAAAACC GCAGTCGCTG TGCCAGTACA GCGGCAAGGT CGTGGTAGTC
GTCAACACCG CCAGCTTTTG CGGCTTTACC CCGCAGTACA AGGGCCTGGA AGCGCTGCAT
GCCAAATACC AGGGGCGCGG CCTGGTGGTG CTGGGCTTTC CGTCCAATGA CTTTTCGCAG
GAAACCGGCA GCAACAAGGA GATTGCCGAC TTTTGCGAGA ACACCTTCGG CGTGAAATTC
CCGATGTTCA CCAAGACCCG CGTGACCGGC AAGGACGCCA GCCCGCTCTT TAAACAGCTG
GCCGACAAGA CCGGCACCGC GCCGCGCTGG AACTTCTACA AATACATCAT TGCGCGCGAC
GGCACGGCGG TGGCCGCCTT CAATTCCATG ACCGACCCGG CAGGCGGCAA GTTCGTGGCC
GAAATCGAAA AGCAGCTGGC CAGGCCATGA
 
Protein sequence
MAWALIASAA LAATFPAGAA SLDAPSTPPS CPALLQQNVL RLQDEKPQSL CQYSGKVVVV 
VNTASFCGFT PQYKGLEALH AKYQGRGLVV LGFPSNDFSQ ETGSNKEIAD FCENTFGVKF
PMFTKTRVTG KDASPLFKQL ADKTGTAPRW NFYKYIIARD GTAVAAFNSM TDPAGGKFVA
EIEKQLARP