Gene Pnap_3908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3908 
Symbol 
ID4690053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4172617 
End bp4173705 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content71% 
IMG OID639836926 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_984125 
Protein GI121606796 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0347674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCCG ATCACCACAT GGGCGGCCTG GGGCACTTCA CCTTCGTCAG CCAGCCGCAG 
CGGGTGGCGT TCGGTGCCGG CATGCTGGCG CGCACGGGCG CCGAACTCGA TGCCATGGGG
GCGCGCAGGG CTATCTTGCT CTGCACGCCG CAGCAGCGGG CGCAGGCCGA GCAACTGGCC
GACCTGCTCG GCTCGCGCGC CGCCGGCATC TTCGACGGGG CCGTGATGCA TGTGCCGCTC
GCCACCGCAC AGGATGCGCG CCGGTTTGCG GCGCAGCACG GCGCCGACTG CGCGGTGGCC
ATCGGCGGCG GCTCGACCAT CGGCCTGGGC AAAGCGATTG CGCTGGACTC CGGGCTGCCG
GTGCTGGCCA TTCCCACCAC CTATGCGGGC TCGGAGATGA CGCCGATCTA CGGCCTGACC
GACAACGGCC TGAAGCGCAC CGGAAGGGAT TTGCGCGTCC TGCCGCGCAC CGTGATCTAC
GACCCCGAAC TCACGCTGGC GCTGCCGGTC GGCATGTCGG TCGTCAGCGG CATCAACGCC
ATCGCCCATG CGGCGGAGGG CCTGTATGCC GCCGACGGCA ATCCGGTCAT GAGCCTGCTG
GCCGAAGAAG GCATTGCGGC GCTGGCGCGC GCACTTCCGG CCATCCGGCT GGATGCGCGC
GACCTGCGGG CGCGCGCCGA CGCGCTCTAC GGCACATGGC TGTGCGGCAA GGTGCTGGGC
AGCGTCGGCA TGGGCCTGCA CCACAAGCTG TGCCACACGC TGGGCGGCAG CTTCAACCTG
CCGCATGCCG AAACACACAC CATCGTGCTG CCCCATGCGC TGGCCTACAA CAGCGCGGCC
GCGCAGCCGG CGATGCGGCG CATCGCCAGG GCCTTGCAGG GCGACAACGC CGCGATGGCG
GTGTACCGGC TGGCGCAGTC CAACGGCGCG CCGCTGGCGC TGAAGGACAT CGGCATGCAG
GCAGCGGACC TGGACCGCGC CTGCGCGATC ACGATGCAAG ACGAGTACCC GAACCCGCGC
CCGTTGCAGG CCAAGGCCTT GCGGCAATTG CTGCAGGACG CTTTCGACGG CGCGCCTCCC
GCCCCGTGA
 
Protein sequence
MMADHHMGGL GHFTFVSQPQ RVAFGAGMLA RTGAELDAMG ARRAILLCTP QQRAQAEQLA 
DLLGSRAAGI FDGAVMHVPL ATAQDARRFA AQHGADCAVA IGGGSTIGLG KAIALDSGLP
VLAIPTTYAG SEMTPIYGLT DNGLKRTGRD LRVLPRTVIY DPELTLALPV GMSVVSGINA
IAHAAEGLYA ADGNPVMSLL AEEGIAALAR ALPAIRLDAR DLRARADALY GTWLCGKVLG
SVGMGLHHKL CHTLGGSFNL PHAETHTIVL PHALAYNSAA AQPAMRRIAR ALQGDNAAMA
VYRLAQSNGA PLALKDIGMQ AADLDRACAI TMQDEYPNPR PLQAKALRQL LQDAFDGAPP
AP