| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3898 |
|---|
| Symbol | |
|---|
| ID | 4689732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 4159773 |
|---|
| End bp | 4162562 |
|---|
| Gene Length | 2790 bp |
|---|
| Protein Length | 929 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639836916 |
|---|
| Product | (glutamate--ammonia-ligase) adenylyltransferase |
|---|
| Protein accession | YP_984115 |
|---|
| Protein GI | 121606786 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1391] Glutamine synthetase adenylyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0281621 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.154183 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATT CTTCAACTGC CTGTCTGAAA ACCCCTGTTG CCGTGGGGTT GACCGCCCCG
GCCACCTCGC CGGCTTCGTC GGCTTCGACC TACTCGCGCT ATGTCCAGCG CATTCGCCGC
CGCTATGCCG CACAGATGCC GCTGCTGCCC GCCGGCGCGC CGGTGCGCGC CACGATGCAG
GCCACGCTCG ATGCGCTGCT GACCGGCGGC CTGGAAACCG GCGCCGCCCT GCGCGTCTTG
CGTCAGCTGG TCCTTGAACG GCTGGTGCTG CTCGATTGCG ACGGTCCTGG CGCGAATCAG
GCGCCGCTGC ACGTCGTGAC CCGCGCCATG ACCGAGCTGG CCGAACTGGC GCTTGACGTG
GCCATGCGCC ACTCGCGGGA AGCGCTCGAT GCGCAGCACG GCGCGCCCCA GGCCCCGGGC
GGCGTGCCGG CGCAAATGTG GGTGGTCGGC ATGGGCAAGC TCGGCGCGCG CGAACTCAAT
GTGTCCAGCG ACATCGACCT GATCTACGTC TATGACCATG ACGGCGACAC GGCCGGCCGC
CCCGACGGCC GGGGCCAGAT TTCCAACCAC GAGTATTTCG CGCGCCAGGT CAGGGCGGTG
TTCAGCCTGA TCGGCGACGC CACCGAGCAC GGCTTTGTGT TTCGCGTCGA TCTGGCGCTG
CGACCCAACG GCAATTCCGG CCCGGCGGCG GTGTCACTGA GCGCGCTGGA AGAATACTTT
CAGGCGCAGG GCCGCGAGTG GGAGCGCTTT GCCTGGCTCA AGAGCCGCGT CGTGGCGCCG
CTCGAATGCA TCCAGAGTGG CTCGGCGCGG GCCCTGCGCG GCCCGGTGCT GCCGTTTGTG
TTCCGGCGCT ACCTGGACTA CAGCGTGTTC GATGCGCTGC GCGTGCTGCA CCGGCAGATC
CGCGAGCATG CGGCCAAGCG CTGCGCCGGC CACCCCGAGC GCGCCAACGA CGTGAAGATG
TCGCGCGGCG GCATCCGCGA GATCGAATTC ACCGTGCAGC TGCTGCAGGT GGTGCGCGGC
GGGCAGTTTC CCGAACTGCG CACCCGGCCC ACGCTCGACG CCCTGCAGCG CGTCGCCCAT
GCCGGGCTGA TGCCGCAGGA CACCGCCGAC GCCATGGCGC GCGCCTATGA CTTCCTGCGC
CGCGTCGAGC ACCGCATCCA GTACCTGGAC GACCAGCAGA CGCATGTGCT GCCGACGCGC
GACGACGACC TGGCCTGGAT TGCGCAGACG CTGGGCTACG GCGACTGCTG CGCCTTCCTG
TGCGACCTGG ACAGCCACCG CGAGCTGGTC GCCGGCGAGT TCGACCGGCT GCTCGGCGGC
CAGCCCAAGT GCAATGGCAA GGGCTGCGGC AAAGCGGGCG ACAGGCCGGT CCAGCAGCTC
GATGACCTGC TCGACCAGCT GCCGCCCGAG TGGCCGGCGC AGTTCAGGAG CCGCCTGGCG
CTGTGGTGCC AGCATCCGCG CATCCTGGCC CTGCGCGAGG AATCGCGCGC GCGCCTGAGC
CGGCTGGTGC AGCGCACCGC CCACTGGCTG CTCGAAGGCA GCGTGAGCGA AGAGGCGGCG
CTGCGGCTGA TCGACTGGAT CGAGCCGCTG CTGCGCCGCG AAAGCTACCT GGCACTGCTG
ATGGAGCGCC CGTCGGTGCA CGAGCGGCTG CTGCGGCTGC TGGGCGCGGC CAAGTGGCCG
GCGCGCTACC TGATGCAGCA CCCCGGCGTG ATCGACGAGC TGGCCAGCGA CGAGCTGATG
CGCGAGCGCT TTGACGCGGC CACCTTTTCC AGCGACCTGC AGCAGCGGCT TGCAGCGCTC
AGGCGCACCG GCGAGGATGA CGAGGAAACC TGCCTGAACC TGCTGCGGCG CGCCCACCAT
GTTGAGGTGT TCCGCACCCT GGCGCGCGAT GTGGAAGGCG TGCTCACGGT CGAGCAGGTG
GCCGACGACC TGAGCGCGCT GGCCGAAGCG ATTCTCGCCC TCACCACCGA CTGGTGCTGG
CGGCACCTGA AGAACCGGCA CCGCGACAAG CCGCAGTTCG CCATCATTGC CTATGGCAAG
CTGGGCGGCA AGGAACTGGG CTACGGCAGC GACCTGGACA TCGTGTTCGT CTATGAAGAC
GAGGACGAGC GCGCCCCCGA GGTGTATGCC GCCTTCGTTC GCAAGCTGAT CAACTGGCTG
ACCCTGAAGA CCGGCGAAGG CGACCTGTAC GAGATCGACA CCGCGCTGCG CCCCAACGGC
AATTCGGGCC TGCTCAGCAC GCCGTTCGAA GCCTATGCCA ACTACCAGCA GCAGCGCGGC
AGCAACACCG CCTGGACCTG GGAGCACCAA GCCATGACGC GCGCGCGTTT CGTGCTGGGC
AGCGAGTCGC TGCACCAGCG CTTTGACGAG GTGCGCCGGG CAGTCATCAC CGCGCCGCGC
GACCCGCTGG CCCTGCGCCA GGAAATCGAG GACATGCGCC AGAAGGTGCG CGGCGCGCAC
CCCATCCGGG GCGGCAAGTT CGATGTCAAG CACAGCGCCG GCGGCATGGT CGATGCCGAA
TTCGCGGTGC AGTTCCTGGT GCTGTCCGAA TCGGCCCGGC ACCCGGAACT GGTCGATAAC
GTCGGCAACA TCGCCCTCTT GCTACGCGCG GAAAGCGCCG GACTGCTGCC GGGCGGCGTG
GGCCAGGATG CTGCCAGCGC CTACCGCGAA CTGCGCCGGG TGCAGCATGT GGCGCGCCTG
AACGAAGCGC CGACGCAGGT CATGCCGCCC GAATTGCAGC GCGAGCGTGA AGCGATCCAG
AAGCTGTGGA GCACGGTGTT CGACGCCTGA
|
|---|
| Protein sequence | MPDSSTACLK TPVAVGLTAP ATSPASSAST YSRYVQRIRR RYAAQMPLLP AGAPVRATMQ
ATLDALLTGG LETGAALRVL RQLVLERLVL LDCDGPGANQ APLHVVTRAM TELAELALDV
AMRHSREALD AQHGAPQAPG GVPAQMWVVG MGKLGARELN VSSDIDLIYV YDHDGDTAGR
PDGRGQISNH EYFARQVRAV FSLIGDATEH GFVFRVDLAL RPNGNSGPAA VSLSALEEYF
QAQGREWERF AWLKSRVVAP LECIQSGSAR ALRGPVLPFV FRRYLDYSVF DALRVLHRQI
REHAAKRCAG HPERANDVKM SRGGIREIEF TVQLLQVVRG GQFPELRTRP TLDALQRVAH
AGLMPQDTAD AMARAYDFLR RVEHRIQYLD DQQTHVLPTR DDDLAWIAQT LGYGDCCAFL
CDLDSHRELV AGEFDRLLGG QPKCNGKGCG KAGDRPVQQL DDLLDQLPPE WPAQFRSRLA
LWCQHPRILA LREESRARLS RLVQRTAHWL LEGSVSEEAA LRLIDWIEPL LRRESYLALL
MERPSVHERL LRLLGAAKWP ARYLMQHPGV IDELASDELM RERFDAATFS SDLQQRLAAL
RRTGEDDEET CLNLLRRAHH VEVFRTLARD VEGVLTVEQV ADDLSALAEA ILALTTDWCW
RHLKNRHRDK PQFAIIAYGK LGGKELGYGS DLDIVFVYED EDERAPEVYA AFVRKLINWL
TLKTGEGDLY EIDTALRPNG NSGLLSTPFE AYANYQQQRG SNTAWTWEHQ AMTRARFVLG
SESLHQRFDE VRRAVITAPR DPLALRQEIE DMRQKVRGAH PIRGGKFDVK HSAGGMVDAE
FAVQFLVLSE SARHPELVDN VGNIALLLRA ESAGLLPGGV GQDAASAYRE LRRVQHVARL
NEAPTQVMPP ELQREREAIQ KLWSTVFDA
|
|---|
| |