| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3897 |
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| Symbol | |
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| ID | 4689751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4155562 |
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| End bp | 4159701 |
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| Gene Length | 4140 bp |
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| Protein Length | 1379 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639836915 |
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| Product | hypothetical protein |
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| Protein accession | YP_984114 |
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| Protein GI | 121606785 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.663381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCCTA CCCTTACCAG CCCGCCAGTT TTGCCAGCCT TGCCGTCCCG ACGCCTGCGG
TGGATTGCCG TGGCCCTGCG CGGCCTGCTG TGGCTGGTCG CCTCGGCCTG GCTGCTCTTT
GGCCTGAGCT GGCTGGTGCT CCACGGCTGG ATTGTGCCGC GAATCGCCGA GTTTCGTCCG
CGCCTGGAAG CCCAGGCCAG CCGGGCGCTC GGTGTGCCGG TCCGCATCGG CCAGATCACC
GGCCGCTCGG AAGGAGCCAT TCCCTCCTTC GAGCTGCATG ACGTCAGCCT GCTCGATGCG
CAGGGGCGCG AAGCGGTGCG CCTGCCGCAC ATTCTGGGCG CGCTTTCACC TTCCTCGCTG
TGGGGGCTTG GCTTTGAACA ACTGGTGATC GACCGGCCCG AAGTCGATAT CCGGCGCGCT
GCCGACGGAA AAATCTTTGT CGGCGGCCTA GAGGTCTCCA AGGACAGCGA CACCGGCCAC
AGCGCCATGG CGGACTGGCT GTTTTCGCAG ACCGAATTCA TCGTGCGCGG CGGCACCGTG
CGCTGGACCG ACGAGATGCG CCAGGCGCCG CCGCTGGCCT TGAGCCAGGT CGATGGCGTG
ATGAGGAATG GCCACCGCCG CCACCTGATG CGCCTGGACG CGACGCCGCC GCCCGAATGG
GGCGAGCGCT TCAGCCTCAG GGGCATCTTC AGGCAGCCGC TGCTCTCTAG GCGAACCGGC
GATTTCGCGG CCTGGACGGG GCAGGTGTAC GGGGACTTTT CGCATGTCGA TGTGTCGCGC
ATCCAGCGCC ATGCCAGCCT GGAGTCGCTG GGGCTGGCGC TGAACGGGGG GCAGGGCGCC
TTGCGCGCCT GGCTTGACGT CGGCAAGGGA AAAGTCACCG GCGCGCTGGT CGATGTGGCG
CTGCGGGACG TGGACGCCCG GCTGGGCAGC CGGCTGGAGC CGCTGGCTTT TGAATCCCTG
GCCGGGCGCA TGGGCGCAAG CCAGCATGCC GGCGGATTTG ATGTCAGCAC CGAAGGCCTT
CAGTTCCGCC TGCAAGACGG CCTGCAGTGG CCAGGCGGCA ACCTGGCGCT GGCTCACACC
CGCGCGTCGC GGCGCGGACC CGAGCACACC ACCCTCAAGG CCGACAGGCT GGACCTGGCC
GCCCTGGCCC GGATCGCCAG CCGCCTGCCG CTGGACAACA CAGCCCAGGC GCTAGTGGCT
TCTTTCGCGC CCCAGGGGCT GGTGGAAACG CTGGATGCCC GCTGGCAGGG GCCACTGGAT
GCGCCCTCGG CCTTTGCGGT CAAGGGCCGT GTGGCGGGGT TGAGCGTGGC CGCGCTGCCG
GCCGCAAGCG CCCTGCCGGA CACCCCTGGC CGGCCCGGCG TCAGCGGCGC GACGGTGGAT
TTCAACCTGA CGCAGGACGG CGGCCAGGCC AGCGTGAAGA TTGCAAAAGG CGCTCTGGAG
CTGCCCGGAG TTTTTGAAGA CTCGAAGCTG GCGCTCGACC GCTTGTCCAC CGAGGCGCAA
TGGAAGCTCT CGGGCAAAAA AATCGATCTG CAATTGCGCG ATGTGCAGTT TGCCAATGCC
GACGCCCAGG GCCAGGCGCA GGTGCGCTGG CGCACCGATG ACCGCGCCGC CGGCCCGCCC
GAAGCCGGTG GCTCGCCGGA TCGCCGCTTC CCCGGCATCC TCGACCTGCA GGGCAGCCTG
AGCCGGGGCG ACGGCAGCCG CGTGCATCGC TACCTGCCGC TGGTGCTCGG AGACGATGTG
CGCCACTATG TGCGCGACGC GGTGCTCAAG GGGCAGGTCA GCGACGTGAA GTTCAAGGTC
AGCGGTCCGG TCGAATACCT GCCTTTCGCC GATCCGGCCC AGGGGGATTT CCAAGTGTCG
GCCAGGGTGA AAAACGGGCA TTTCGTCTAT GTTCCCAAAG CGCTGCAGCC GCCGGGCGCG
GCGCCCTGGC CGGCGCTGAC CGAACTCAAT GGTGAACTGC TGTTCAGCCG GGCATCGCTG
GACGTGAAGG GCGCCAGCGG CAAGGTCGCC GGCCTGCCGG GACTGCAACT GGTCAAGGGC
GAGGCCCGCA TCGCCGACCT CGAACACCAG GCGACGGTCG AGGTGGCGCT GGACATCAAG
GGCGTGCTCT CGGACGCGCT GGGTTTTGTC AACACTTCCC CGGTTGGCGA GATGACCGAG
CGCGCCCTGG CCAGCGCCAC GGCCGGCGGC GCGGCCGACT ACCGCTTTCG CCTGCGCCTG
CCCATCAATG AGATTGACAA ATCGACCGTC GAGGGCAGCG TGACCCTGCC GGGCAATGAC
GTGAGGTTCG TGCCCGAAGC GCCGCTTCTG GGCCAGATCA AAGGCGTGGT GAACGTGACC
GACCAGGGCT TTACCGTGGC CGGTGCCCAG GCGCGGCTGC TCGGGGGCGA CGTTCGCATC
GACGGCGGAA CCCGGCCCCT GGCGTCTGCA ACCGGCCCCA AGACCAGTGT GGCCTTCAGA
GCGCAAGGCA CGGTCACGGC CGAAGGGCTG CGCCAGGCCA AGGAGCTGGG GCTGGCGTCG
CGCGTGGCCG CGCATGCCAG CGGCAGCACG GCCTACACCG CCTCGCTGCT GTTCCGGCGC
GGCGTGCCGG AGGTCATGGT GTCCAGCAGC CTGCAGGGCA TGGCGCTGAG CCTGCCGGCG
CCGCTGGCCA AGACGGCCGA AGCCGCGTTG CCGATCCGCT TTGAGAACGT GCTGCTGCCC
GGCTCGATGG AGGCTGGCCA GGCGCTGCAG GACCAGCTGT CGGTCAGCAT CGGGCGCGTG
GCGGCCATCA GCTACCTGCG CGACCTCAGC GGGCAGGAGG CCCGCGTGAT CCGGGGCAGC
ATCGGCGTGG GGCTGGACGC GGGTGAAGCG ACTCCCGCGC CAGAGTCCGG CGTGGGGGCG
AACATCAACC TGGCGCGGGT GGACCTGGAT GCCTGGGAAA AAGTCCTGAA CGATGCGTCC
GGCGGCGTCA TGGCGCAGGC CGCCGCAAGC TCTTCTACCG GGCCGGCGGC AGCCATGAGC
TATCTGCCCA ACGTGATGGC CATACGCGCC AGGGAATTGA AGGTGCAGGG GCGCAGCCTG
AACCATGTGG TGGTGGGCGC CAGCCGCGAG GGCCTGAACT GGCGCGCCAA CCTCAATGCC
GCCGAGCTGG ACGGCTACAT GGAGTTTCGC CAGCCCGGCG CGCAGGGCGC CGGCCGCGTC
TATGCGCGGC TGTCGCGCCT GAGCCTGGCC GCCAGCGAGG CGAGTGAAGT CGAGGCCATC
CTGGACGAGC AGCCGGCCAG CATTCCGGCG CTCGATATCG TGGTCGAAGA CCTGGAGCTG
CGCGGCAAGA AGCTGGGGCG GGTTGAAATC GACGCGGTCA ACCGGGGCGC CACGGCGGCC
GAAGGCGGCG TTCGCGAGTG GCGGCTGAAC AAGTTCAATG TCATCCTGCC CGAAGCCGTG
CTGACCGCCA CCGGCAACTG GGCTGCGGCC CTGCCCGCCG GGCGCCGCCG GTCGGCGATG
AATTTCAGGC TCGACATTGC CGATTCGGGC GAGTTGCTCA AGCGCCTGGG CATGAACGGC
GTGATCCGGC GCGGCAAGGG CACGCTCGAA GGCCAGATCG ACTGGATGGG TTCGCCGCTG
AGCCTGGACT ATCCGAGCCT GAGCGGGGAG TTCCATGTGA ACGTCGCATC CGGCCAGTTC
ATGAAGGCCG ACCCGGGCAT TGCCAAGCTG CTGGGCGTGC TGAGCCTGCA GTCATTGCCC
CGGCGGCTGA CGCTGGATTT CCGCGATGTT TTTTCAGAAG GGTTTGCCTT TGACTTTGTT
CGCGGCGATG TCACGATTCG CCAGGGCGTG GCGCATACCA ACAACCTGCA GATGAGCGGC
GTCAATGCCG CCGTGCTGAT GGAAGGCCGC GCCAGCATTG CCGATGAAAC GCAAAACCTC
AAGGTGGTCG TGGTGCCTGA AATCAATGCC GGCACGGCCT CGCTGATTGC CACGGCCATC
AACCCGGTGG TGGGCCTGGG CAGCTTTCTG GCGCAGATGT TCCTGCGCCG CCCGCTGATG
GAAGCGGCCA CCCAGGAATT CCAGATTGAC GGAAGCTGGT ACGACCCCAA AATCACGAAA
ATTGATCGCA AGGCCCGGGC CAAGTCCCAG GCAAGCGAGT TGACTGTGGA GAAACGCTGA
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| Protein sequence | MEPTLTSPPV LPALPSRRLR WIAVALRGLL WLVASAWLLF GLSWLVLHGW IVPRIAEFRP
RLEAQASRAL GVPVRIGQIT GRSEGAIPSF ELHDVSLLDA QGREAVRLPH ILGALSPSSL
WGLGFEQLVI DRPEVDIRRA ADGKIFVGGL EVSKDSDTGH SAMADWLFSQ TEFIVRGGTV
RWTDEMRQAP PLALSQVDGV MRNGHRRHLM RLDATPPPEW GERFSLRGIF RQPLLSRRTG
DFAAWTGQVY GDFSHVDVSR IQRHASLESL GLALNGGQGA LRAWLDVGKG KVTGALVDVA
LRDVDARLGS RLEPLAFESL AGRMGASQHA GGFDVSTEGL QFRLQDGLQW PGGNLALAHT
RASRRGPEHT TLKADRLDLA ALARIASRLP LDNTAQALVA SFAPQGLVET LDARWQGPLD
APSAFAVKGR VAGLSVAALP AASALPDTPG RPGVSGATVD FNLTQDGGQA SVKIAKGALE
LPGVFEDSKL ALDRLSTEAQ WKLSGKKIDL QLRDVQFANA DAQGQAQVRW RTDDRAAGPP
EAGGSPDRRF PGILDLQGSL SRGDGSRVHR YLPLVLGDDV RHYVRDAVLK GQVSDVKFKV
SGPVEYLPFA DPAQGDFQVS ARVKNGHFVY VPKALQPPGA APWPALTELN GELLFSRASL
DVKGASGKVA GLPGLQLVKG EARIADLEHQ ATVEVALDIK GVLSDALGFV NTSPVGEMTE
RALASATAGG AADYRFRLRL PINEIDKSTV EGSVTLPGND VRFVPEAPLL GQIKGVVNVT
DQGFTVAGAQ ARLLGGDVRI DGGTRPLASA TGPKTSVAFR AQGTVTAEGL RQAKELGLAS
RVAAHASGST AYTASLLFRR GVPEVMVSSS LQGMALSLPA PLAKTAEAAL PIRFENVLLP
GSMEAGQALQ DQLSVSIGRV AAISYLRDLS GQEARVIRGS IGVGLDAGEA TPAPESGVGA
NINLARVDLD AWEKVLNDAS GGVMAQAAAS SSTGPAAAMS YLPNVMAIRA RELKVQGRSL
NHVVVGASRE GLNWRANLNA AELDGYMEFR QPGAQGAGRV YARLSRLSLA ASEASEVEAI
LDEQPASIPA LDIVVEDLEL RGKKLGRVEI DAVNRGATAA EGGVREWRLN KFNVILPEAV
LTATGNWAAA LPAGRRRSAM NFRLDIADSG ELLKRLGMNG VIRRGKGTLE GQIDWMGSPL
SLDYPSLSGE FHVNVASGQF MKADPGIAKL LGVLSLQSLP RRLTLDFRDV FSEGFAFDFV
RGDVTIRQGV AHTNNLQMSG VNAAVLMEGR ASIADETQNL KVVVVPEINA GTASLIATAI
NPVVGLGSFL AQMFLRRPLM EAATQEFQID GSWYDPKITK IDRKARAKSQ ASELTVEKR
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