Gene Pnap_3896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3896 
Symbol 
ID4690221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4154753 
End bp4155559 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content67% 
IMG OID639836914 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_984113 
Protein GI121606784 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.667951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.360936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG CCGCCATCCA GATGGTTTCA GGTACTGGCG TTCAGGGCAA CCTGGACGCC 
GCGCGGGCGC TGCTGGCGCA GGCTGCGGCG CAGGGCGCCG AGTTGGCCGT CCTGCCCGAG
TATTTTTGCG TCATGGGCAT GAAGGACACC GACAAGCTCA AGGTCCAGGA AAAATCCGGC
AGCGGCCTGA TCCAGGACTT CCTGAGCCGC TCGGCGCGCG AGTTGCGGCT GTGGATCGTC
GGCGGCACAT TGCCCACGGC AACCGGCGAT GCGGGCCGGG CGCGCAACAG TTCCCTGGCC
TATGCGCCCT CGGGGGTCTG CGTGGCCCGC TACGACAAGA TGCACCTGTT CCGCTTCACG
CAGGGCGGTG AAGACCACGA CGAAACCCGC GTGCTCGACG CCGGGACGCA GCCGGTGCGC
TTCGAGCTGG CGTCGCGTGA CGGCCACATC TACACGGTTG GCCTGAGCGT CTGTTACGAC
CTGCGCTTTC CGGAGCTGTA CCGCGCCCTG AAGGCCGACC TGCTGCTGGT TCCCAGCGCC
TTCACCTACA TCACCGGCCA GGCGCACTGG GAGTTGCTGC TGCGCGCCCG GGCGATTGAA
AACCTGGCCT ATGTGGCCGC CGCCGCGCAG GGCGGACTGC ACGAGAACGG CCGCCGCACC
TGGGGTCACA GCATGGTGGT CGGGCCATGG GGCGAGATTC TGGCGGAGCA GGCCGAAGGG
CCGGGCGTCA TCATGGGTGA GGTGCTGCAT GCCCGGCTGC AGGAAGTTCG CCAGCGCCTG
CCCGCCTTGA GCCACCGGGT GCTATGA
 
Protein sequence
MKIAAIQMVS GTGVQGNLDA ARALLAQAAA QGAELAVLPE YFCVMGMKDT DKLKVQEKSG 
SGLIQDFLSR SARELRLWIV GGTLPTATGD AGRARNSSLA YAPSGVCVAR YDKMHLFRFT
QGGEDHDETR VLDAGTQPVR FELASRDGHI YTVGLSVCYD LRFPELYRAL KADLLLVPSA
FTYITGQAHW ELLLRARAIE NLAYVAAAAQ GGLHENGRRT WGHSMVVGPW GEILAEQAEG
PGVIMGEVLH ARLQEVRQRL PALSHRVL