| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3887 |
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| Symbol | |
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| ID | 4689554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4142389 |
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| End bp | 4146009 |
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| Gene Length | 3621 bp |
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| Protein Length | 1206 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639836905 |
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| Product | indolepyruvate ferredoxin oxidoreductase |
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| Protein accession | YP_984104 |
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| Protein GI | 121606775 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.398161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.512264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCC CCTTGCCCGA GCACATCCGC AAAGCGCTGG AAACCGTCAC GCTGGACGAC
AAATATTCCA TCGACCATGG CCGCGCCTTC ATGAGTGGCG TGCAGGCGCT GGTTCGGCTG
CCGATGCTGC AGCGCACGCG CGACGCCATC GCCGGCCTGA ACACAGCCGG CTTCATCAGC
GGCTACCGGG GCTCGCCGCT GGGCGGCTAC GACCAGGCGC TGTGGGCGGC CAGGAAGCAC
CTGGAGGCGC AAAACATCGT CTTCAAGCCC GGCGTGAACG AGGAACTCGG CGCCACCGCC
GTCTGGGGCA CGCAGCAGCT CGACCTGTAC CCGCAGACCA ACAAGTTCGA CGGCGTATTC
GGCATCTGGT ATGGCAAGGG GCCGGGCGTG GACCGCTGCT CGGACGTGTT CAAGCATGCC
AACATGGCGG GTACGGCCAA ACACGGCGGC GTCATCGCCA TCGCCGGCGA CGACCATGTG
AGCAAAAGCT CGACCGCGCC GCACCAGAGC GACCACATCT TCAAGGCCTG CGGTCTGCCG
GTGTTTTTTC CGTCGAGCGT GCAGGAAATC CTCGACATGG GGCTGCATGC CTTTGCCATG
AGCCGCTTTT CGGGCGTCTG GTCGGGCATG AAGACGATCC AGGAAGTGGT CGAGTCGTCG
AGTTCGGTAT CGGTCGATCC GGACCGGGTA AAGATCATCA TGCCGGAGGA TTTCCAGATG
CCGCCGGGCG GCCTGCACAT CCGCTGGCCC GACGCGCCGC TGGAGCAAGA AGCGCGGCTG
ATGGACTACA AGTGGTATGC CGCGCTGGCC TATGTGCGCG CCAACAAGCT CAACTACAAC
GTGATTGCTT CGGCGAACGA CCGTTTCGGC ATCATCGCCA GCGGCAAGGC TTTCAACGAC
ACGCGCCAGG CGCTGGCCGA TCTGGGGCTG GACGAAGACA CCTGCCACCA GCTCGGCATC
CGGCTGCACA AGGTCAATGT GGTCTGGCCG CTCGAAGCCA CCATCACCCG CGACTTCGCC
ATGGGCCTGC AGGAAATCCT GGTGGTCGAG GAAAAGCGCC AGGTCATCGA ATACCAGATC
AAGGAAGAAC TCTACAACTG GCGCGCCGAC GTGCGGCCCA ATGTGCTCGG CAAGTTCGAC
GAGCCCGAAG GCGACGAGTC GGGCGGCGAA TGGAGCCGCC CCAACCCGAG CGAGAACTGG
CTGCTGCGCG CCAAGGCTGA CCTGACGCCG GCCATCATCG CCAAGGCGAT TGCCAAGCGC
CTGACCAAGC TCGGCGTGCC GTCCGACATC GTGGCGCGCA TGCAGGCCCG GCTGGCGGTG
ATCGACGCCA GAGAACGCGC GCTGGTCGAG ACCAAGCTAG AGACCGGCGA GCGCGCGCCG
TGGTTTTGCA GCGGCTGCCC GCACAACACC AGCACCCGCG TGCCCGAGGG TTCACGCGCG
GTGGCTGGCA TCGGCTGCCA TTACATGGCG ACCTGGATGG ACCGCAGCAC CTCGACCTTC
ACCCAGATGG GCGGCGAGGG CGTGCCGTGG GTCGGGCAGT CGGCGTTCAC CACCGAGCCG
CACATCTTCG CCAACCTGGG CGACGGCACT TACTTTCACA GCGGCCTGCT GGCGATTCGC
CAGAGCATTG CCAGCGGCGT CAACATCACC TACAAGATTC TCTACAACGA CGCGGTCGCG
ATGACCGGCG GCCAGCAGGT CGGCGAGCGG CCCGAGGGCC ATTCGGTCGC GCAGATTGCC
CATAGCCTGC GCGCCGAGGG CGTGGCCCGG CTGGTCGTGG TCACCGACGA GCCCGAAAAA
TACCATGGCC GCACGCATAC GCTGGACAGC AGCGCTGCGC GCGCCGGCCA CGCCGAGTTG
ATCAACGACC TACCGCCGGG CATTGAGGTC TTCCACCGCG ATGAACTGGA CCGCATCCAG
CGCGAATTCC GCGAACTCAA GGGAACGACG ATCATCATCT ACGACCAGAC CTGCGCGACT
GAAAAGCGCC GCCGCCGCAA GCGTGGCACC TTGGCGGACC CGGCCAAGCG CGTGGTGATC
AACGAGCTGG TCTGCGAAGG CTGCGGCGAC TGCTCGGTGC AGTCCAACTG CCTGTCGGTC
GAGCCGCTGG AAACCGAGTT CGGCCGCAAG CGCCAGATCA ACCAGAACAC CTGCAACAAG
GATTACTCCT GCCTCAAGGG TTTTTGCCCG AGCTTTGTGA CGGTTGAAGG CGGCCAGCTC
AAGAAGCCGA AGAAAGAGAA AAAGGGCGAT CTGGCCAGCC TGCCAGCGAT TCCTGATCCG
GTGCTGCCGG TGGCCGAGAA CGCTTGGGGC ATCGTCGTCG GCGGCGTCGG CGGCACCGGC
GTCATCACCA TCGGCCAGCT GCTGGGCATG GCCGCGCACC TCGAAGGCAA GGGCGTGGTC
ACGCAGGATG CGGGCGGGCT GGCGCAAAAA GGCGGCGCGA CCTGGAGCCA TATCCAGATT
GCCAACCGGC CGGAAGCCAT CTACACCACC AAGGTCGATA CCGCGAAAGC CGACCTGGTG
ATCGGCTGCG ACCCCATCGT GACCGCCAAT GCGTACACGC TGGCAACCAT GCAGCCGGGC
CGCACCTTCG TGGCGATGAA TTCGCACGGC GCGCCGACGG CGGCCTTCGT GACCAACCCC
GACTGGCAGT TTCCGGGCGG CAACTGCGAA AACGCGGTGC GTTCGGCCGT GGGCGCTGAC
GCAATGGCCA GTTTCGATGC CGAGCAGGTC GCGGTGCAGC TGATTGGCGA CTCGATCTAC
ACCAACCCGC TGATGCTGGG CTTTGCCTGG CAAAAAGGCC GGGTGCCGCT GTCACATGCC
GCGCTGATGC GGGCCATTGA ACTCAACAAT GTGCAGGTTG ACAACAACAA GGCGGCGTTT
GAATGGGGCC GCCGCTGCGC CCATGACCTG CTGGCGGTTC AGTCGCTGTT CAAGGCCGCG
CAGGTGATCC AGTTTGTCAA GAAGCCGTCG CTGGCCGAGA TGCTGAATAA GCGCGTGGTT
TTCCTGACGG CCTACCAGAA TGCGGCCTAT GCGCAGACTT ACCAGGCTTT CGTGGAAAGG
GTTCGCGTTG CGGAAGCGTC GCTGGGCAAA ACCACGCTGA CCGAGGCGGT CGCCCGCTAC
CTCTTCAAAC TGATGGCCTA CAAGGATGAG TACGAAGTGG CCAGGCTGCA TACCGACACC
GGTTTCCTGA ACAAGGTCAA CGCCATGTTC GAGGGCGATT TCAAGCTCAA CTACCATCTG
GCACCGCCCT TGATCGCGTC GAAAAACGAC AAGGGCGAGT TGCAAAAGCA GCAGTTCGGC
CCCTGGATGC TGACCGGCTT CAGGCTGCTG GCCAGGCTCA AGGGCTTGCG CGGCACGCCC
TTCGACGTGT TCGGCCGCAG CGACGAGCGC CGGGAAGAGC GCGCGCTGAT TGCCGAGTAC
CGGGCGAGCA TCGAGGAAGT GCTGACTGGC CTCACGCCTG AAAAGCATGC CGCAGCCGTG
GAAATTGCCC GGATTCCCGA GTTGATCAAA GGCTATGGCC ACGTTAAGGC GCGCCATCTG
GTTACTGCCC GCCCGCAATG GGCGGCACTG ATGCAGGCCT TCCGCCAGCC CGTCTCCCTC
CAGAAGAAGC AGGCTGCCTG A
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| Protein sequence | MNAPLPEHIR KALETVTLDD KYSIDHGRAF MSGVQALVRL PMLQRTRDAI AGLNTAGFIS
GYRGSPLGGY DQALWAARKH LEAQNIVFKP GVNEELGATA VWGTQQLDLY PQTNKFDGVF
GIWYGKGPGV DRCSDVFKHA NMAGTAKHGG VIAIAGDDHV SKSSTAPHQS DHIFKACGLP
VFFPSSVQEI LDMGLHAFAM SRFSGVWSGM KTIQEVVESS SSVSVDPDRV KIIMPEDFQM
PPGGLHIRWP DAPLEQEARL MDYKWYAALA YVRANKLNYN VIASANDRFG IIASGKAFND
TRQALADLGL DEDTCHQLGI RLHKVNVVWP LEATITRDFA MGLQEILVVE EKRQVIEYQI
KEELYNWRAD VRPNVLGKFD EPEGDESGGE WSRPNPSENW LLRAKADLTP AIIAKAIAKR
LTKLGVPSDI VARMQARLAV IDARERALVE TKLETGERAP WFCSGCPHNT STRVPEGSRA
VAGIGCHYMA TWMDRSTSTF TQMGGEGVPW VGQSAFTTEP HIFANLGDGT YFHSGLLAIR
QSIASGVNIT YKILYNDAVA MTGGQQVGER PEGHSVAQIA HSLRAEGVAR LVVVTDEPEK
YHGRTHTLDS SAARAGHAEL INDLPPGIEV FHRDELDRIQ REFRELKGTT IIIYDQTCAT
EKRRRRKRGT LADPAKRVVI NELVCEGCGD CSVQSNCLSV EPLETEFGRK RQINQNTCNK
DYSCLKGFCP SFVTVEGGQL KKPKKEKKGD LASLPAIPDP VLPVAENAWG IVVGGVGGTG
VITIGQLLGM AAHLEGKGVV TQDAGGLAQK GGATWSHIQI ANRPEAIYTT KVDTAKADLV
IGCDPIVTAN AYTLATMQPG RTFVAMNSHG APTAAFVTNP DWQFPGGNCE NAVRSAVGAD
AMASFDAEQV AVQLIGDSIY TNPLMLGFAW QKGRVPLSHA ALMRAIELNN VQVDNNKAAF
EWGRRCAHDL LAVQSLFKAA QVIQFVKKPS LAEMLNKRVV FLTAYQNAAY AQTYQAFVER
VRVAEASLGK TTLTEAVARY LFKLMAYKDE YEVARLHTDT GFLNKVNAMF EGDFKLNYHL
APPLIASKND KGELQKQQFG PWMLTGFRLL ARLKGLRGTP FDVFGRSDER REERALIAEY
RASIEEVLTG LTPEKHAAAV EIARIPELIK GYGHVKARHL VTARPQWAAL MQAFRQPVSL
QKKQAA
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