Gene Pnap_3882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3882 
Symbol 
ID4689218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4135899 
End bp4136414 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content59% 
IMG OID639836900 
Producthypothetical protein 
Protein accessionYP_984099 
Protein GI121606770 
COG category[S] Function unknown 
COG ID[COG2922] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAG TTCTGGTCTA TGTTTATGAA AATTACTGGC AAGGCGCGGC CTGCCCTGAA 
TTTGACCGGC TGGGGCGCAA ACTCATTGCA GCAGGATTTG AAGCCGAAGA AATCCAGCAG
GCGCTGATCT GGCTGGAAGG GCTGAATGTT GCAGCCAAAG GCACGCAGAT CAGCCTGCCC
GATGAATCAA ACCCCGATTC TGCTGATCCC GTCAGCGCGC ATCCCCGCAT GCTGGCGCAG
TCAAGCCACA GCCTGCGCAT CTATTCGGTG GCCGAGCAGG AACATCTGGG CGCGCAAAGC
CTGGGATTTG TGTGCTTTCT CGAAGCCTCC GGCGTGCTGC CACCCTACAT GCGCGAAATC
GTGCTTGACC GCGCGATGGC CGCGCCCGGC GATCCGGTCT CGCTGGACGA CCTGAAAATC
ATCGTGCTCA TGGTGTACTG GAGCTTTGGC GAAGAGCCTG AAGCGCTGGT GCTCGATGAG
CTGTGCGACG ACACCGAAGG CCGCCTGGCG CACTGA
 
Protein sequence
MFEVLVYVYE NYWQGAACPE FDRLGRKLIA AGFEAEEIQQ ALIWLEGLNV AAKGTQISLP 
DESNPDSADP VSAHPRMLAQ SSHSLRIYSV AEQEHLGAQS LGFVCFLEAS GVLPPYMREI
VLDRAMAAPG DPVSLDDLKI IVLMVYWSFG EEPEALVLDE LCDDTEGRLA H