Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3877 |
Symbol | |
ID | 4690189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 4130117 |
End bp | 4131088 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639836895 |
Product | methionyl-tRNA formyltransferase |
Protein accession | YP_984094 |
Protein GI | 121606765 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGTTA TTTTTGCCGG TACTCCTGAA TTTGCCCGTG TGGCGCTTGC TCAACTGCAC GGCGCCGGTT TTGAAATCCC CCTGGTGCTG ACCCAGCCCG ACCGCCCCGC CGGCCGGGGC ATGAAGCTGC AGGCCTCCGC CGTCAAGCAG TGGGCCGAGA GCCACGCCAT TGCGGTGGCC CAGCCCAGGA GCCTGCGGCT GGATGGCAAA TACCCTGAAG ACGCCGCTGC CGCCCGCGCC GCCATCGAGG CCGCGCAGGC TGATGTGATG GTGGTCGCTG CCTACGGGCT GATCCTGCCG CAGTGGGTGC TCGACATGCC CCGGCTGGGG TGTTTGAACA TTCACGCTTC CCTGTTGCCG CGCTGGCGCG GCGCGGCGCC GATTCACCGC GCGATCCAGG CCGGCGACCC GCAGACCGGC GTCACCATCA TGCAGATGGA TGCGGGGCTG GACACCGGCG ACATGCTGCT GGTCGAAAAA CTCGCGATTC AAGCCACCGA CACCACCGCC ACGCTGCACG ACAAGCTGGC CGCGCTGGGC GGGCAGATGA TCGTGCAGGC GCTGGAACTG GCCGCTGCTG GCCAGCTTGA GCCAGTCCGC CAGCCCGCCG AGGGCGTGAC CTATGCCCAC AAGATCGAAA AATCCGAAGC GGCGGTGGAC TGGACCCAGC CGGTAGCCAG CATTGACCGG CACATCCGCG CCATGACGCC TTTTCCGGGC GCCAGCGCGC AGATCGGTTC CGACACGGTC AAGCTCTGGA GCTCTGAAAT TGATAGCTGC TCATGCCCGC CAGATATGCG CAAAGGCCTG ATTTTGTCTG CAAATTCCGA TGGCGTGCGG GTGGCGTGCG GTGATGGCGT GCTGAAAGTC ACCGAACTGC AGCGCGCCGG CGGCAAGCGC CTGCCCGCCG CCGACTTCCT GCGCGGCTTT GACTTGCAGG CCGGCCAGTT GTTCGACCTT CCCAATCCGT GA
|
Protein sequence | MRVIFAGTPE FARVALAQLH GAGFEIPLVL TQPDRPAGRG MKLQASAVKQ WAESHAIAVA QPRSLRLDGK YPEDAAAARA AIEAAQADVM VVAAYGLILP QWVLDMPRLG CLNIHASLLP RWRGAAPIHR AIQAGDPQTG VTIMQMDAGL DTGDMLLVEK LAIQATDTTA TLHDKLAALG GQMIVQALEL AAAGQLEPVR QPAEGVTYAH KIEKSEAAVD WTQPVASIDR HIRAMTPFPG ASAQIGSDTV KLWSSEIDSC SCPPDMRKGL ILSANSDGVR VACGDGVLKV TELQRAGGKR LPAADFLRGF DLQAGQLFDL PNP
|
| |