| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3861 |
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| Symbol | |
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| ID | 4688311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4115633 |
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| End bp | 4116616 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639836879 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_984078 |
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| Protein GI | 121606749 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.647921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGC CCGGCACCGA CCCGCAGGCG ATTGTGGAGG CCGCCCGCCG CATCCAGGCC
GGCGCGCTGG TCGGCTTTCC GACCGAAACC GTGTATGGTT TGGGCGCCGA TGCGTCCAGC
GATGCCGCCG TGGCCGGCAT TTTTAAAGCC AAGGGCCGGC CCGCCGACCA CCCGCTGATC
GTTCATGTGG CCGACGCCAG CCAGGTGAGC GACTACGCCA GCAGCGTTCC GGCGTTTGCC
GCCCGGCTGA TGCAGGCCTT CTGGCCCGGG CCGCTGACGG TGATCCTGCC GCGCCGCGAA
GGCGTGGCGC TGGCCGCCGC CGGGGGCCAG GAGTCGATTG GCCTGCGCTG CCCGGCGCAT
CCGGTGGCGC TGGCTTTTTT GAAGGCCTGT GGCACGGGCG TGGCCGGGCC GAGCGCGAAC
CGCTTTGGCC GCGTCAGCCC GACCACGGCG CTGCATGTCG CGCAGGAGTT TGGCGACGAG
CTGCTGGTGC TCGACGGCGG GCCGTGCGCG GTCGGCATCG AGTCCAGCAT TGTCGATTGC
ACCCGGGGCC GGCCGGTGCT GCTGCGCCCC GGCGTGCTGA CCCGCGCGCA GCTTGAAGCC
GCCTGCGGCG AGCCGGTGCT GGGCAAAGAG GATGCGCAGG CGGCCGGCAG CGCGCCCCGC
GCCTCCGGCA CGCTGGAAGC GCATTACGCG CCGAACGCCA AGGTTCGCCT GATGGATGCC
GGCGCGATGC AGGCCGCCCT CGACCTGCTG GGCGCCGACG CGGCGCATAT CGCGATTTAT
GCCCGCACGC TGCTGGGCAT CAAATCGACT AGGGTGCTAT ACCGCCGCAT GCCCGACGAC
GCGCTGGCCA CCGCGCAGCA GCTGTTCGCC GTGCTGCGCG ACTTCGACGC CCAGGGCGCC
AGGCTGATCT GGGTGGAAAC CCCGCCCGTG GCCTGCGAGT GGGACGGCGT GCGCGACCGG
CTGGGGCGCG CTGCGGCGAG CTAG
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| Protein sequence | MIRPGTDPQA IVEAARRIQA GALVGFPTET VYGLGADASS DAAVAGIFKA KGRPADHPLI
VHVADASQVS DYASSVPAFA ARLMQAFWPG PLTVILPRRE GVALAAAGGQ ESIGLRCPAH
PVALAFLKAC GTGVAGPSAN RFGRVSPTTA LHVAQEFGDE LLVLDGGPCA VGIESSIVDC
TRGRPVLLRP GVLTRAQLEA ACGEPVLGKE DAQAAGSAPR ASGTLEAHYA PNAKVRLMDA
GAMQAALDLL GADAAHIAIY ARTLLGIKST RVLYRRMPDD ALATAQQLFA VLRDFDAQGA
RLIWVETPPV ACEWDGVRDR LGRAAAS
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