| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3860 |
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| Symbol | |
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| ID | 4688303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4114468 |
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| End bp | 4115613 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639836878 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_984077 |
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| Protein GI | 121606748 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.470803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTAC CGTTCCCCTT GCCCGCAAAG TCTCTTATCG CTGCTGCCGT TGCAACCCTG
GCTTTTGCCG CCCACGCCCA GGACGCGCAG ACCGTCAAGA TCGCCCACGC CGGCCCCATC
TCGGGCGGCA TCGCGCACAT CGGCAAAGAC ACCGAAAACG GCGTTCGCCT GGCGCTGGAC
GAGCTGAACG CCCAGAACCT CGTGATCGGC GGCAAGAAGA TCAAGTTCGA ACTGGTGGCC
GAGGACGACG CCGGCGACCC GCGCCAGGCC ACCGCCGTGG CCCAGAAGCT GTGCGACACC
CAGGTGGCCG GCGTGATTGG CCACCTGCAA TCGGGCACGT CCATTCCCGC CGCCAGCGTG
TACAACAAGT GCGGCATTCC CAACATCACG GCGTCCGCCA CCAACCCCGA CCTGACCAAG
CCGGGCTACA AAACCACCTT TCGCCTGATC GCCAACGACA ACGCGCTGGG CGCGGCGCTC
GCGATTTTTG CCGCCGACAC GCTGAAAATC AAGAAAGTGG CGGTCATTGA CGACCGCACC
GCCTACGGCC AGGGGCTGGC CGACGTGTTC AAGGCCACGG CCAAACAAAA GGGCATCGAG
GTCGTCGGCG AAGAGTTCAC CACCGACAAG GCCACCGATT TCATGGCCAT CCTGACCGGC
ATCAAAGCCA AGAAGCCCGA CGCGATTTTC TTCGGCGGGC TCGATGCTCA GGCCGGCCCG
ATGCTGCGCC AGATGGAGCA GCTCGGCCTG TCGAATGTGA AATTCTTTGG CGGCGATGCG
ATGTGCACCG AAAAGCTGCC CGACCTGTCG AGCAAGGCCG GCTCAGTGAA AAACGTGACC
TGCGCCACCG GCGGCGCCTC GATCCAGAAG ATGCAGGGCG GCGCCGAGTG GAAGAAAAGG
TACGACGCCA AGTTCCCCGG CCAGTTCCAG ATCTACAGCC CCTATGCCTA CGACGCCACC
TACGTGCTGG TCGATGCGAT GAAGCGCGCC AACTCGGTGG ACCCCAAAAC CTACCTGCCC
TTCATCGGCA AGACCCAGTA CAAGGGCGTG ACCGCCAGCA TCGCCTTCAC GGCCAACGGC
GAGTTGACCA AGCCGGCCGT GACGCTGTAC AGCTACAAAA ACAACCTGCG GACCGCGCTG
AACTGA
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| Protein sequence | MLLPFPLPAK SLIAAAVATL AFAAHAQDAQ TVKIAHAGPI SGGIAHIGKD TENGVRLALD
ELNAQNLVIG GKKIKFELVA EDDAGDPRQA TAVAQKLCDT QVAGVIGHLQ SGTSIPAASV
YNKCGIPNIT ASATNPDLTK PGYKTTFRLI ANDNALGAAL AIFAADTLKI KKVAVIDDRT
AYGQGLADVF KATAKQKGIE VVGEEFTTDK ATDFMAILTG IKAKKPDAIF FGGLDAQAGP
MLRQMEQLGL SNVKFFGGDA MCTEKLPDLS SKAGSVKNVT CATGGASIQK MQGGAEWKKR
YDAKFPGQFQ IYSPYAYDAT YVLVDAMKRA NSVDPKTYLP FIGKTQYKGV TASIAFTANG
ELTKPAVTLY SYKNNLRTAL N
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