Gene Pnap_3850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3850 
Symbol 
ID4688240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4107341 
End bp4107685 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content63% 
IMG OID639836868 
Productalkylphosphonate utilization operon protein PhnA 
Protein accessionYP_984067 
Protein GI121606738 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2824] Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism 
TIGRFAM ID[TIGR00686] alkylphosphonate utilization operon protein PhnA 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAG CCCCCGCCTG CCCCCAATGC ACGATGGAAA ACACCTACCC GGACGGTGAA 
AACTACGTCT GCGCCGACTG CGGCCACGAG TGGCCCATGG CCGCAGCCGC CCTTGACGCC
GACGACAGCG ACGATGCGGT GGTCAGGGAT TCCAACGGCA ACGTGCTGGC CGACGGCGAC
GCCGTGGTGC TGATCAAGGA CCTGAAGGTC AAGGGTTCAT CGACCACGCT CAAGATGGGC
ACCAAGGTCA AGAGCATCCG CCTGGTCGGC GGCGACCACG AGGTGGACTG CAAAATGGAC
GCCGGCAGCT TCATGCTCAA GGCCTGCTTC CTGAAAAAGG TTTGA
 
Protein sequence
MTTAPACPQC TMENTYPDGE NYVCADCGHE WPMAAAALDA DDSDDAVVRD SNGNVLADGD 
AVVLIKDLKV KGSSTTLKMG TKVKSIRLVG GDHEVDCKMD AGSFMLKACF LKKV