| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3847 |
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| Symbol | |
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| ID | 4688216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4103738 |
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| End bp | 4105324 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639836865 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_984064 |
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| Protein GI | 121606735 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGCC AGCCCGCAGG CGGTCGGCGT CACGCATCCA GCGATTATCC GGCCTGCCAG
CGCGCCCGGC CGGCAACTGA TAATCGCCGC ATGCTTTTGA CCCCCTTCCC GGCCCGATTC
ACCGCGCGCC TGACCGCCGG CCTGCTGGCA GCGTTGGCCA GCCTGTCCGC CAGCGCCCAA
ACCCTGCCGC CCGAAGTCGA TGCCCTGCTG GCGCGTGCCA AGGTGCCGCG CGAGGCCTTC
GCCGCCGTGG TCGTCGATGC CGCACCGGCC ATCAACGGCA GGGCCGCGCC GCTGCTCAGC
TGGCGCGCCG GCAGCGCCAT GAACCCCGCG TCGGTCATGA AGCTGGTCAC GACCTATGCC
GGGCTGGAAC TGCTCGGCCC GGCCTACACC TGGAGCACGC CGGTCTATGC CGACGGCCCG
ATTGCCAATG GCGTGCTGTC CGGCAACCTC ATCATCCAGG GCCGGGGCGA CCCCAAGCTG
GTGATGGAGC GGCTGTGGCT GCTGCTGCGC CGGGTGCAGG GCTTGGGCAT CAAGACCATC
ACAGGCGACA TCCTGCTCGA CCGCAGCGCC TTTGCGGCGT CAACGCAACA CCCCGGCGAC
TTCGACGGCG AGGCGCTGCG CCCCTACAAC GTGCAACCCG ATGCGCTGCT GCTCAACTAC
AAGTCGGTGG TGATGACGTT TGCGCCGAAT CCGGGCAGCG GCAGCGCCAG CATCAGCTAC
GACCCGCCGC TGGCCGGCGT GCGGATGCAG CCCGGCGTGC CGCTGTCGGC GGGAAGCAAC
GGCCGCGCTG GTCTGGCCGA ATGCGGCGAC TACCGGGCGC AGCTCCAGCC CGACTTTGCC
GACCCGCTGC GCATGGCCTT TGCCGGCAGC TACCCGGCGG CCTGCGGCGA GAAGGTCTGG
GCCATCGCCT ACCCCGACCC GGCCAGCTAT GCGCAGCGGG CGATTGCCGG GCTGTGGCAG
GAAATGGGTG GCACGCTGGG CGGACAGGTC AGGGATGGCG TGGCCCCGCC CGGATTGGCG
CCGGCGTTCG AGATGGAATC GGCGTCGCTG GCCGAAATCA TCCGCGACAT CAACAAGTTC
AGCAACAACG TGATGGCGCA GCAGCTGTTC CTGACGCTCA GCCTGCAGCG CCCGGGCGGC
GCCAGCAACG AGGCTTCGCG CGAGGCGGTG CGCGGTTGGT GGCAGGGCCG TTTTGGTGCG
CAGAACGGCG GGCCGGGCAA TGCCCCGGAC ATGCCGGTGC TGGACAACGG CTCGGGCCTG
TCGCGGCTGG AGCGCGTCAC GCCACAGGGC CTGGCGCGCA TGCTGCAGAC CGCCTATGTC
TCGGGCGCCA TGCCCGAGCT GATGGCCTCG CTGCCGATCA GCGGCGTCGA TGGCACCTTG
AAGCGCAGCA AGTCGCAGGT CTCGCAGGGC TGGGCGCACC TGAAGAGCGG CACCCTGCGC
GACGCCACCG CGCTGGCCGG CTACGTGCAC ACGCCCAGCG GCCGGCGCCT GGTGGTGGTC
GGCATCGTCA ACCACGCCAA CGCACCGGCG GCGCGGCCGG CGCTCGAAGC GCTGGTGGAC
TGGGCCGTCA AGGAAGGCAG CCGGTGA
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| Protein sequence | MPRQPAGGRR HASSDYPACQ RARPATDNRR MLLTPFPARF TARLTAGLLA ALASLSASAQ
TLPPEVDALL ARAKVPREAF AAVVVDAAPA INGRAAPLLS WRAGSAMNPA SVMKLVTTYA
GLELLGPAYT WSTPVYADGP IANGVLSGNL IIQGRGDPKL VMERLWLLLR RVQGLGIKTI
TGDILLDRSA FAASTQHPGD FDGEALRPYN VQPDALLLNY KSVVMTFAPN PGSGSASISY
DPPLAGVRMQ PGVPLSAGSN GRAGLAECGD YRAQLQPDFA DPLRMAFAGS YPAACGEKVW
AIAYPDPASY AQRAIAGLWQ EMGGTLGGQV RDGVAPPGLA PAFEMESASL AEIIRDINKF
SNNVMAQQLF LTLSLQRPGG ASNEASREAV RGWWQGRFGA QNGGPGNAPD MPVLDNGSGL
SRLERVTPQG LARMLQTAYV SGAMPELMAS LPISGVDGTL KRSKSQVSQG WAHLKSGTLR
DATALAGYVH TPSGRRLVVV GIVNHANAPA ARPALEALVD WAVKEGSR
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