Gene Pnap_3841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3841 
Symbol 
ID4687827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4097851 
End bp4098300 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content66% 
IMG OID639836859 
Productthioesterase superfamily protein 
Protein accessionYP_984058 
Protein GI121606729 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCCA TCACCCTGCG CTTTCTCGCT GAACCCAGCA CCGTCAACTT TGGCGGCAAG 
GTGCATGGCG GCACCGTCAT GAAATGGATC GACGAGGCGG GCTACGCCTG CGCCACGCGC
TGGGCCAAAC GCTCCTGCGT GACGGTGTCG GTGGGCAGCA TCCGCTTTCA GCGCCCGATC
CTGATCGGCG ACCTGGTCGA AGTCGAGGCG CGCCTGGCCT ACACCGGCCG CAGCAGCATG
AACATTGCGG TCGAGGTGCG CAGCGGCGAC ATCAAGACCG GCCAGATGAA CGTCGTCACC
GACTGCCTGG TGGTCTTCGT GGCCGTCGAT GCCGATGGCA AAACCATTCC CGTCGAAGCC
TGGAATCCTG AAACGCCCGG CGACATGGCG CTGGCGCAAC GCGTCAAGGC GCATCTGGAC
GCCGCGCGGA CCGGGCAGCT CGGTGGCTGA
 
Protein sequence
MSSITLRFLA EPSTVNFGGK VHGGTVMKWI DEAGYACATR WAKRSCVTVS VGSIRFQRPI 
LIGDLVEVEA RLAYTGRSSM NIAVEVRSGD IKTGQMNVVT DCLVVFVAVD ADGKTIPVEA
WNPETPGDMA LAQRVKAHLD AARTGQLGG