Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3834 |
Symbol | |
ID | 4688960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 4090725 |
End bp | 4091747 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639836852 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_984051 |
Protein GI | 121606722 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAATA GCCAGATTCT CAGCACGGAT GACCTTGCCA GCACAGAGCG TGCGCTGGCC TGGGAGCACT GGATGTCGGG GCTTTTTGGC GGACTGGACT CCGACCTGTA TGGCGATAGC GTGTTTGATG GACATATTGC CACTTCGCAT GCCGGTGACG TGGTGATGAC CCGGCTGGAG GCCAATCGGC ACCGCGTCAT GCGCAGTCCC GGCCTGGCGC GGACCAGCGA CATGAGTTAC CTGAAGATCA TCGCGCCCTG GCAAGGCAAC GCCGCGCTGG AGCAGCAGGG CCGGCAAACC TGGGTGCGTC CCGGCGGCTG GGCGATTTAT GACACGACCG GCAGCTACGA AGTGGCCAAC CCCGAACGCT CCCTGCACCT GATCGTGATG CTGCCCAGGG AGCAACTGAC CGAGCGCGGC TTGCGCATCG ATGCGCTGAT GGGACGGCTC GTAGGCGGCA GCAGCGGCAT TTCGCGCGTG GCGCTGGAAA CGATGCGCAG CATTTTTCAG GAACTGCCCC TCATGACGCC CGAGGCGGCC CGGGGTGCTG GCGATCTGGT GATTGATCTG GTGCGTTTGT CGCTACAGGA GCTGGCCGGC CGGACCACCG CCACGACGCA GCAGGAGGCT TTGAAGGATC GCATCCGCGA CTTCATTGGC CAGCACCTGC GCGACCCGGA CCTGTCGCTG GACCGCATTG CCCAGGTGCT CAACTGCAGC AAGCGGCATC TGCACAATGC CTTTGCCGAT GAAGAAGACA CGCTGGGCCA TTACATCTTG CGCCGGCGGC TGCAGGCCTG CATGCGGGAT TTGAAGAACC CGGTACACCT GCCGCGCACC ATCACCGACA TTGCGTTTTC CTGGGGCTTC AATAACGGAA CGCACTTCAG TCGCGTGTTT CGCGAACACG CCGGGCTGTC ACCCAGCGAA TTCAGGCGGG CGGCGCTGTT GAAAGAAGAG GTCATCCCGG CCCCCCTGCC CATTCCTGGC CGGATGCACT GGAAACAAAA AAATCAGCTC TGA
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Protein sequence | MPNSQILSTD DLASTERALA WEHWMSGLFG GLDSDLYGDS VFDGHIATSH AGDVVMTRLE ANRHRVMRSP GLARTSDMSY LKIIAPWQGN AALEQQGRQT WVRPGGWAIY DTTGSYEVAN PERSLHLIVM LPREQLTERG LRIDALMGRL VGGSSGISRV ALETMRSIFQ ELPLMTPEAA RGAGDLVIDL VRLSLQELAG RTTATTQQEA LKDRIRDFIG QHLRDPDLSL DRIAQVLNCS KRHLHNAFAD EEDTLGHYIL RRRLQACMRD LKNPVHLPRT ITDIAFSWGF NNGTHFSRVF REHAGLSPSE FRRAALLKEE VIPAPLPIPG RMHWKQKNQL
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