Gene Pnap_3822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3822 
Symbol 
ID4687560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4077258 
End bp4078112 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content69% 
IMG OID639836840 
Producthypothetical protein 
Protein accessionYP_984039 
Protein GI121606710 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCCG AACTTGCCAG CCCCGCCCTT TCGCCCGACC TGATGCCCTG GCTTGCGGGC 
CTGGCGGGGC TGCTCATTGG GGTCGCCACG CTGGAAGGCC TGGCCAAGAC CTTCATCTAC
AAGGCCGCCT ACGACTGGCG GGCCTATGCC GCGTCGCTGG CCGATGCGCT GCTGCGCCGC
ATCGCGGACG GCCTGGGCCT GTCGCTGGCA GTGCCGGTGC TGGCCTGGGT GCATGCGCAC
CGGCTCTGGA CCATCGAGCT GGCCGGCCCG CTGGCCTGGG GCCTGCTGTT TATCGGGCAG
GAGTTTTTCT ACTATGGCTA CCACCGCGCG GCGCACCGGG TGCGCTGGTT CTGGGCGACG
CACTCGGTGC ATCACTCGCC GAACGAGCTG ACCCTGATGG CTGCCGTGCG GCTGGGCTGG
ACCGGCAAGC TCACGGGCAC CGCGCTGTTT TTCGTGCCGC TGGTCTGGCT GGGTTTCTCG
CCGGTGGCGG TGCTTGGCGT GGTGGCTGCC AATCTGCTCT ACCAGTTCTG GCTGCATGCG
CCGTGGATGC CGCGCCTGGG GCCGCTCGAA TGGGTGCTGA ACACGCCGGC CCACCACCGC
ATTCACCATG CGTCCAACCC TGAGTACCTG GACTGCAACT ATGGCGGCGT GCTGATCGTC
TTTGACCGGC TGTTTGGCAC CTTCACCGCA GAACGGCCGG ACGTGCGGAT CAAGTACGGC
CTGACCGAGC CGCTGCACAG CTACAACCCG CTGCGCATCG GCCTGCATGA ATGGCTCAGG
CTGGGCCGCG ATGCGTGGAA GGCGCCGGGC TGGGCGGCGC GGGCGCGGGT GCTGTTCGGC
CCGCCGGGCG GGTAG
 
Protein sequence
MHAELASPAL SPDLMPWLAG LAGLLIGVAT LEGLAKTFIY KAAYDWRAYA ASLADALLRR 
IADGLGLSLA VPVLAWVHAH RLWTIELAGP LAWGLLFIGQ EFFYYGYHRA AHRVRWFWAT
HSVHHSPNEL TLMAAVRLGW TGKLTGTALF FVPLVWLGFS PVAVLGVVAA NLLYQFWLHA
PWMPRLGPLE WVLNTPAHHR IHHASNPEYL DCNYGGVLIV FDRLFGTFTA ERPDVRIKYG
LTEPLHSYNP LRIGLHEWLR LGRDAWKAPG WAARARVLFG PPGG