Gene Pnap_3813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3813 
Symbol 
ID4687334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4066329 
End bp4067306 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content66% 
IMG OID639836831 
Producthypothetical protein 
Protein accessionYP_984030 
Protein GI121606701 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.369508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAC GCCCACTGCT TCAAGCCTTC GCCGCGCTGG CCCTGTGGCC TGCATTCACC 
CTGCCTGCGC AGGCGCAGGA CTTTCCGCCC AAAAAGCCGG TGAACCTGGT CGTCGGCTTT
GCGGCCGGCG GCGCTGCCGA CGCCGCCGCA CGCCTGATCG CCAAAAAACT GGGCGAGAAC
ATCGGCCAGA CGGTGATCGT GGACAACAAG CCGGGCGCGG GCGGCAACAT TGCCCACCAG
TTCGTCGCCA ACGCACCGGG CGATGGCGCG ACGCTGCTGT TCGGCTCGGT CGGGCCGCTG
GCGATTTCGC CGCACATGAT GAAGCTCGGC TACGACCCGG TGCGCGACCT GGCGCCCATC
ACCATGGGCG TGAACTTTCC CAATGTGCTG GTGGTGCATG CGGGCGTCGG TGTCAAGACC
TTGGCCGAGT TTGTGGCGCT GGCCAAAAAG AAACCCGGCG GCCTGGATTT CGCGTCCAGC
GGCGCCGGGT CGGCCTCGCA CCTGGCCGGG GAACTGTTCA ACGCGCGGGC CGGCATCGAG
ACGGTTCACA TTCCCTACAA GGGCGGGGCG CCTGCATTGC AGGATCTGCT GGGCGGGCGG
ATCGCGTCCT ACTATTCCAC CCCCGCCACC GCCGGCCCGC ACATCGACTC GGGCAAGCTG
ATCCCGCTGG CCACCACTGG CCTGAGCCGT CCGGCCTTCA TGCCCAATGT GCCGACGATT
GCCGAATCCG GCTACCCGGG CTTCAATGCC ACCAACTGGT ATGCCTTCGT CGCCTCCAGC
AAGACGCCCA AGCCCCTGCT GGACCGCTGG AACCTGGAAC TGGTGAAGGT GCTGAATGCG
CCCGATGTGC GCGAGCAGCT GCTCAAGCAC GGCTTGAGCC CGCAGCCCGG CACGCGCGAT
GAGCTGGCCC GCTACATGGC CAGCGAGTCC GCGACCTGGG GCAAGGTGGT TCGCGAGCGG
AAAATCTCGG CTGAATGA
 
Protein sequence
MRKRPLLQAF AALALWPAFT LPAQAQDFPP KKPVNLVVGF AAGGAADAAA RLIAKKLGEN 
IGQTVIVDNK PGAGGNIAHQ FVANAPGDGA TLLFGSVGPL AISPHMMKLG YDPVRDLAPI
TMGVNFPNVL VVHAGVGVKT LAEFVALAKK KPGGLDFASS GAGSASHLAG ELFNARAGIE
TVHIPYKGGA PALQDLLGGR IASYYSTPAT AGPHIDSGKL IPLATTGLSR PAFMPNVPTI
AESGYPGFNA TNWYAFVASS KTPKPLLDRW NLELVKVLNA PDVREQLLKH GLSPQPGTRD
ELARYMASES ATWGKVVRER KISAE