| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3812 |
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| Symbol | |
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| ID | 4686842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4065219 |
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| End bp | 4066301 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639836830 |
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| Product | porin |
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| Protein accession | YP_984029 |
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| Protein GI | 121606700 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.625248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACTC ACTCCACCGG CTGCCGCGCC CCGCTGCTTG GCCTGTCATT GCTGGCATTG
GCCTGCGCAG GCCACGCCCA AAGCAGCGTC ACCCTCTACG GCGTGGCCGA TGCCGGCGTG
CGCCACGGCA GCGGGCTGAC CGCTGCCTAC GGCGGATCGG CAGACTCCAG CAACGCCGTG
AACAGCGGCA TCAACACCAC CAGCCGGTTC GGCTTTCGCG GTTCGGAAGA CCTGGGCGGC
GGCCTGAAGG CTATTTTCAA CCTCGAATCG GGTGTCAACC TCGACACCGG CGCTTCGGCC
AGCGCCACCA AGCTGTTCGA CCGCGCGGCC AACGTGGGCC TGCAAGCCAG TTGGGGAAGC
GTCACGCTGG GCCGCCAGAC CACGGTGCTC GCCGACGTGG TGAGCGCCAC CGATCCGCTG
GGCAGCCGGT TCGCCAGCTT CAACCCCAAC GTGGGCATTG CCGCGCTGAG TGCGCACCGG
CTTGGTGCCG AGTTCGGCCC CGCAGGCTCC ACCACTGGCG CTTACCGGCT GGACAACTCG
GTCAAGTACG TGGGCCGCTT CAGCGATTTC AGCGTGCGGG CCATGCATGC ATTTGGCGAG
CAGGCCGGCA ACTCGTCGAA CCTCTCGTCT TCGGGCGTGG GCGCGGGCTA CCAGTCGGGC
GGCTACACCG CCGCGCTGTC GTATGCGCAG TTCAGGAATG CGGCCGGCTT GAGTCTCAAG
GGTTATCTGG GCGGCGCCAG CGCCATGATT GGCAGCAACA AGCTTGCGCT GACCTATGGC
AGCCATGAGG CCGAAACCTC CGCCACCGCC AAGACGCGCA ACCGCACGCT GGGCCTGGGC
GGCACCGTGC CGCTGGGCGC GAGCGTGGAC CTGATCCTGG CGCATTACCA GGTCAAGCGC
ACACGCACGG CGGCCGTGGA CGACGGCTTC AACCGCAGCG TGGCTTTCCT GGAGTACAAG
TTTTCGAAAC GCACTCGCGC CTATGCCGAA CTGGACCACA CCCGCTGGAA AAACGGCTAC
CAGGGCGCGG CCTTCAAGAG CAGCGCTTCC GGTGTTTCGG CAGGCGTCGT GCACAGCTTT
TAA
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| Protein sequence | MKTHSTGCRA PLLGLSLLAL ACAGHAQSSV TLYGVADAGV RHGSGLTAAY GGSADSSNAV
NSGINTTSRF GFRGSEDLGG GLKAIFNLES GVNLDTGASA SATKLFDRAA NVGLQASWGS
VTLGRQTTVL ADVVSATDPL GSRFASFNPN VGIAALSAHR LGAEFGPAGS TTGAYRLDNS
VKYVGRFSDF SVRAMHAFGE QAGNSSNLSS SGVGAGYQSG GYTAALSYAQ FRNAAGLSLK
GYLGGASAMI GSNKLALTYG SHEAETSATA KTRNRTLGLG GTVPLGASVD LILAHYQVKR
TRTAAVDDGF NRSVAFLEYK FSKRTRAYAE LDHTRWKNGY QGAAFKSSAS GVSAGVVHSF
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