| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3811 |
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| Symbol | |
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| ID | 4686791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4063824 |
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| End bp | 4065173 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639836829 |
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| Product | fumarate lyase |
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| Protein accession | YP_984028 |
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| Protein GI | 121606699 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.647921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCAA CCATCATCGA CTCCAGAATC TTCGGCGACA TGTTCAGCGA CGCCGCCATG
CGCCAGGTCT GGTCGGACGA AAACCGCACC GCCAAGTACC TCGACATCGA GCGCGCGCTG
GCCAAGGTGC AGGGCGAGCT GGGCCTGATT CCGAAGGAAG CCGCCGACGA GATCGTCAGG
AACTGCAACA TCGAGCAGAT CGACTGGGCC AGGCTCAAGG CCAAGACCGA GCAGATCGGC
TACCCCATCA TTGCCGTGGT CAACCAGATC AATGCCGCCT GCCGTGACAA GCTGGGCGAA
TACTGCCACT GGGGCGCAAC CACGCAGGAC ATCACCGACA CCGCCGCCGT GCTGCAGATC
AGGGAAAGCC TGGCGCTGGT GGAAGCCGAC CTGAAGGACA TCTCCGACTC GCTGGCCAAG
CTGGCGCTTG AGCATCGCGA CACGCCGGTC ATCGGCCGCA GCAACCTGCA GCAGGCCACG
CCCATCACCT TCGGCTACAA GATGGCCAGC ATCCTGGCCG GCATCGAGCG CCACCGCGAG
CGGCTGGAAC AACTCAAACC GCGCGTGCTG GTGGGCGAAT TCGGCGGCGC GTCGGGCACG
CTGTCGTCGC TGGAAACCGG CGCGATGGAA ACCCAGGCCG GGCTGATGAA TGAACTCGGC
CTGGGCCAGC CGCTGATCTC GTGGCACACC GTGCGCGACA ACTTTGCCGA GGTCGGCGCA
TTTCTGGGCA TCGTCGGCGG CTCGCTGGGC AAGATCGCCA TGGACGTGAA GCTGATGATG
CAGACCGAGG TTGCCGAGGT GTTCGAGCCC TATGCGCCGG GGCGCGGCTC GTCATCGACC
ATGCCGCAAA AGCGCAACCC GATTTCATGC CTTTATATCC ACGCCAACAT CTCGGTGGTG
CGCCAGCTGG CCGCCTCGCT GATGGACGCG ATGGTCGCCG ACCACGAACG CTCCACCGGC
CCGTGGGAAA TCGAATGGGT CGCCATGCCG GAAATCTTCT GCCTGATATC GGGCGCGCTC
AAGCAGACCA AGTTCATCCT GAGCGGGCTG GAAGTCGATG CCGCGCAGAT GCGCCGCAAC
ATCGACATGA CGCACGGGCT GGTGATGTCC GAGGCCGTGA TGATGGGGCT GGGGCCTTTC
ATCGGCCGCG AATACGCGCA CGACCTGGTG TATGACATCT GCCGCGCCGC GCTTGAGCAA
AAACGCCCGC TGATCGACCT GCTGGCCGAG CACCCGGAAA TCAACCGGCA CGTCACGCGC
GAACAACTCG CCTCCTTTTG CGACCCGATG AACAACCTGG GCCAGGCCGG CGTGATGGTG
GACCGGGTAT TGGCGGCGCG CAAAGCCTGA
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| Protein sequence | MSATIIDSRI FGDMFSDAAM RQVWSDENRT AKYLDIERAL AKVQGELGLI PKEAADEIVR
NCNIEQIDWA RLKAKTEQIG YPIIAVVNQI NAACRDKLGE YCHWGATTQD ITDTAAVLQI
RESLALVEAD LKDISDSLAK LALEHRDTPV IGRSNLQQAT PITFGYKMAS ILAGIERHRE
RLEQLKPRVL VGEFGGASGT LSSLETGAME TQAGLMNELG LGQPLISWHT VRDNFAEVGA
FLGIVGGSLG KIAMDVKLMM QTEVAEVFEP YAPGRGSSST MPQKRNPISC LYIHANISVV
RQLAASLMDA MVADHERSTG PWEIEWVAMP EIFCLISGAL KQTKFILSGL EVDAAQMRRN
IDMTHGLVMS EAVMMGLGPF IGREYAHDLV YDICRAALEQ KRPLIDLLAE HPEINRHVTR
EQLASFCDPM NNLGQAGVMV DRVLAARKA
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