| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3805 |
|---|
| Symbol | |
|---|
| ID | 4686782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 4056671 |
|---|
| End bp | 4058794 |
|---|
| Gene Length | 2124 bp |
|---|
| Protein Length | 707 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639836823 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_984022 |
|---|
| Protein GI | 121606693 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2828] Uncharacterized protein conserved in bacteria
[COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.245031 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.613822 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGAC GGCGGGAGCA CCAGCAACCC GCGACGCACA GGAAACCCGA TGCTGACACT
GATCACCGCT TGCTGCCGGC CCGAAGGCAC GCCATGCTGA ACCGAAAAAT ACCCTGCGTG
CTGATGCGCG CCGGCACCTC GCGCGGCCCG TTTTTTTTGC GCGAATGGCT GCCCGAGGGC
GATGAGGCCC GCGACCAGGC CTTGATTGGC GCCATCGGCG CTTCAGACCC GCTGCAGCTC
GATGGCCTGG GCGGCGGCAG CACGCTCAAC AGCAAGGTGG CCATCGTGTC GCGCTCCAGC
CAGCCCGGCT GCGACCTGGA CTACCTGTTT GCCCAGGTCG GCGTCGGCCA CCAGTCGGTG
GACACCCGGC CCAACTGCGG CAACATGCTG TCCGGCGTCG CGCCGTTTGC GATTGAGCAA
GGCCTGATTC CGGCGCAGGA CGGCCACACC ACGGCACGGA TTTACAACGT CAACACCGGC
GCGCGCATCG ACGTGACCGT CTGCACGCCC GGCGGCCGCG TCACCTACGA AGGCGATGCC
CGGATTGACG GCGTGGCCGG CACCGCCGCG CCGATTCTGC TGAACTTCCT CGATGCCTGG
GGCGCCATCA CCGGCCAGCT GTTCCCGACC GGGCAGCGCA TTGACGTGAT CGACGGGTTG
GAACTTACCT GCATCGACGC GGCCATGCCG CTGATGATCC TGCGCGCCAG CGACCTGGGC
CTGACGGGCC GCGAGCGGCC GGCAGAACTC GATGCCGACA CGGCGCTCCT GGCGCGCATC
GAAGCGCTGC GCCTGGTGGC CGGCGCCCGC ATGGGCCTGG GCGATGTATC GGGCAGCGTG
ATTCCGAAGC CGGTGCTGGT CAGTGCCGGC GACGGCCCGC TGAGCATCAC CTCGCGCTAC
TTCACGCCCA GGCGCTGCCA TGCGTCGCAT GCCGTGACCG GCGCCATCGG CGTGGCGACC
GCCTTTGCCC TGCCCGGCAC GGTGGCCAGC GGCATGGCCA GGACGGCGGG AAAACACCCG
CTGACGGTGC TGCACCCGGC CGGGCAGATT GACATTGAAG TCGAGCTGCA AGGCGAAGGC
CAGGACGCCA CGATTGAGCG CGCCGCACTG GTGCGCACCG CCCGCAAGAT CATGCAGGGC
GAGTTGCACC TGCCCGGCTA TGTGTTTCCC CGATCCAGCC CCGATCTGGC AGCGAGCCTT
GATGCGGCAC TGCCCTTCCC CGGCAAGGAC ATCCAGATCA TCGTGCCGAC CAGCGCCGGT
GGCGGCAACG ACACCATGGC GCGCACGCTG ACGCGCAAGC TCGGTCCGGT GCTGGGCCAG
TCGGTGACGG TGGACAACCG CGCCGGGGCC AACGGCAGCA TTGCCAGCGA ATACGTGGCC
GCCGCCCAGC CTGACGGCCA TACCCTGATG TTTGGCTACA TCGCCACCCA CGGCATCAAC
CCGGCCTTGC AGGCGCTGCG CTACGACCCT GTGGCCGATT TTGCGCCGAT CGGCCTGGTC
GGCCACTCGC CGACGCTGCT GGTGGTTCAC GCCGACCTTC CGGTGCACAG CGTGGCGGAG
TTGGTCAAAC TGATCCGGTC CCAGCCGGGG CGCTTCAGTT ACGCCTCGGC CGGCGAAGGC
ACGGCGCCGC ACCTGGCGGC CGAACTGTTC AGGCTGCGCA CCGGCATCAC GCTGCCCGGC
CTGGCCCATG CCGGGGCGGC ACCGGCCATT GCCGACACCG CGCGCGGCAA CGCCCAGCTG
ATGTTCCCCA GCCTCTTTAC CGCCCAGCCC TATTTGCGCA GCGGCAAGCT GCGGGCGCTG
GCGGTGGCCG GGCCGGCGCG CCTGGCCAGC CTGCCCGATC TGCCCACGCT GGCCGAGGCG
GGCGTGGCCG GCATCGAGCT GACGCAGTGG TACGCCTTGT TCGCGCCGGC CAGGACGCCG
GCGCCGGTGG TGGCGCAACT CAACAGCGCG CTCAACACCG TGCTGCAAGA CCCTGAAATC
ATCGCCCGCT TCGATGCCGA CGGCGCCCAG GTGCAGACCA GCACGCCCGA GGAGTTGCAC
CGCCTGCTGC TCGCCGAGCG GCTGAAGTGG CGGCAGGTGG TGCAGCAGAC GGGCCTGCGT
ATGGAGCCGC AGGCGGCCGA GTAG
|
|---|
| Protein sequence | MKRRREHQQP ATHRKPDADT DHRLLPARRH AMLNRKIPCV LMRAGTSRGP FFLREWLPEG
DEARDQALIG AIGASDPLQL DGLGGGSTLN SKVAIVSRSS QPGCDLDYLF AQVGVGHQSV
DTRPNCGNML SGVAPFAIEQ GLIPAQDGHT TARIYNVNTG ARIDVTVCTP GGRVTYEGDA
RIDGVAGTAA PILLNFLDAW GAITGQLFPT GQRIDVIDGL ELTCIDAAMP LMILRASDLG
LTGRERPAEL DADTALLARI EALRLVAGAR MGLGDVSGSV IPKPVLVSAG DGPLSITSRY
FTPRRCHASH AVTGAIGVAT AFALPGTVAS GMARTAGKHP LTVLHPAGQI DIEVELQGEG
QDATIERAAL VRTARKIMQG ELHLPGYVFP RSSPDLAASL DAALPFPGKD IQIIVPTSAG
GGNDTMARTL TRKLGPVLGQ SVTVDNRAGA NGSIASEYVA AAQPDGHTLM FGYIATHGIN
PALQALRYDP VADFAPIGLV GHSPTLLVVH ADLPVHSVAE LVKLIRSQPG RFSYASAGEG
TAPHLAAELF RLRTGITLPG LAHAGAAPAI ADTARGNAQL MFPSLFTAQP YLRSGKLRAL
AVAGPARLAS LPDLPTLAEA GVAGIELTQW YALFAPARTP APVVAQLNSA LNTVLQDPEI
IARFDADGAQ VQTSTPEELH RLLLAERLKW RQVVQQTGLR MEPQAAE
|
|---|
| |