| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3803 |
|---|
| Symbol | |
|---|
| ID | 4686768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 4055815 |
|---|
| End bp | 4056342 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639836821 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_984020 |
|---|
| Protein GI | 121606691 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.122492 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.629911 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGGA TAATCTCGCG CATGAATACA CGATGGAAAC CCAATGTCAC GGTGGCGGCC
GTCATTGAAC GGGATTTCGA CGGCGTCCAG AAGTTTTTGC TGGTCGAGGA AGAAACCCGC
GACGGCTTGA GGTTCAACAA CCCGGCGGGC CATCTGGACC CCGGCGAAAG TCCGCTGCAG
GCCTGCGTGC GCGAGACGCT GGAAGAAACC GCCTTTCATT TCACGCCGAC CGCGCTGGTG
GGCGTTTACC TGTCGCGCTT TGAACGCACC CAGGCTGGAC ATGACGAGCC GCTGGACATC
ACCTACCTGC GCTTTACCTT TTGCGGCGAA CTGGGTGCGC ATGTGGCCGG CCAGCCGCTG
GACAAGGGCA TCGTGCGCGC CCTGTGGCTG ACCGTCGATG AAATCAGGGC CAGCGCGCCC
ATGCACCGCA GCCCGCTGCT GCTGACCAGC CTGGAAGACT ACCTGGCCGG GCAGCGTTTT
CCGCTCGACG TGATCACCAC GGACCCTTCC ATTTTGCTAC GAAAATAA
|
|---|
| Protein sequence | MPRIISRMNT RWKPNVTVAA VIERDFDGVQ KFLLVEEETR DGLRFNNPAG HLDPGESPLQ
ACVRETLEET AFHFTPTALV GVYLSRFERT QAGHDEPLDI TYLRFTFCGE LGAHVAGQPL
DKGIVRALWL TVDEIRASAP MHRSPLLLTS LEDYLAGQRF PLDVITTDPS ILLRK
|
|---|
| |