| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3797 |
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| Symbol | |
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| ID | 4686613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4048063 |
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| End bp | 4049763 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639836815 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_984014 |
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| Protein GI | 121606685 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.589487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAC TGATGAACGC AGAGGTGGCT GATCGCCCGT GGCTAAAGGC TTATCCGGCA
GGCGTTCCGG CCGACATTGA TGCTTCGCAA TATCCGTCGC TGGTCGCATT GATGGAAGAA
AGCTTCAAGA AGTACCGGGA CCGCGTCGCC TACAGCTTCA TGGGCAAGGA CATCACTTTT
GGCGAGACCG ACAGCCTGTC AGTTGCTTTC GGCGCTTATC TGCAGGGTCT GGGTCTGGCC
AAGGGCGACC GTGTGGCCAT CATGATGCCC AATGTGCCGC AGTATCCGGT GGCGGTTGCG
GCCATCCTGC GCGCCGGCTA TGTGGTGGTC AATGTGAACC CGCTCTACAC CCCGCGCGAA
CTCGAGCACC AGCTCAAGGA TTCAGGCGCC AAGGCCATCG TGATCGTCGA GAATTTTGCC
TGCACGCTGG AGCAGTGCCT GGCCAACACG CCGGTCAGGC ACATCGTGCT GTGCGCCATG
GGCGACCAGC TGGGGCTGCT CAAGGGCATG CTCGTCAATT ACGTGGTGCG CAGCGTCAAG
AAGATGGTGC CGCCCTTCAA CCTGCCGGGC GCGGTGCCTT TTAACGATGC CCTGGCGCAG
GGCGCGCGCG GCGCACTCAA GCGGCCCGCT ATCGAACCCG ACGACATTGC CGTGCTGCAG
TACACCGGCG GCACGACTGG CGTTTCCAAG GGGGCCGTGC TGCTGCACCG CAACGTGATT
GCCAACGTGC TGCAGTCCGA AGCCTGGAAC GGCCCGGCCA TGGCCAGCCT GCCGGCGGGC
GAGCAGCCTA CTTATGTGTG CGCCTTGCCG CTGTACCATA TTTTTGCCTT CACGGTGAAC
ATGATGTTGG GCATGCGGAC CGGCGGAAAA AACATCCTGA TCCCCAATCC GCGCGACCTT
CCGGCGGTGC TCAAGGAGCT TTCCAAGCAC AAGGTCAACA GCTTTCCGGC CGTCAACACC
CTGTTCAACG GTCTGGCCAA CCACCCGGAC TTCAACACGG TGGACTGGTC GCACCTGAAA
ATCTCGCTGG GCGGCGGCAT GGCGGTGCAA AGCGCGGTGG CCAAGCTGTG GCTGCAAAAG
ACCGGCTGCC CGATTTGCGA AGGCTACGGC CTGTCGGAAA CCTCGCCATC GGCGAGCTGC
AACCCGACCA ACAGCAAGGC CTTCGCCGGC ACCATCGGCG TGCCGATTCC CAGTACCTGG
TTCAAGCTGC TCGACGACGA CGGCCATGAA GTGCCGCCTG GCCAGCCTGG CGAGATTGCC
ATCAAAGGCC CGCAGGTCAT GGCGGGCTAC TGGCAGCGGC CTGACGAGAC CGACAAGGTC
ATGACCCCCG ACGGCTATTT CAAATCCGGC GACATCGGCA TCATGGATGA AAACGGATTT
TTCAAGATCA TTGACCGCAA GAAGGACATG GTCCTGGTCA GCGGGTTCAA TGTCTATCCC
AACGAGATCG AAGACGTCGT GGCCAAACTG GACGGCGTCA TGGAATGCGC CTGCGTCGGC
GTGCTCGATG AAAAATCGGG TGAAGCCGTC AAGCTCGTGA TCGTGAAGAA GAATCCCGAC
CTGACCGAAG CGCAGGTACG TGCCTATTGC AAGGAAAACC TCACCGGCTA CAAGCAGCCC
AAGGTGGTGG AGTTCCGCAC CGAACTGCCC AAGACGCCGG TCGGCAAGAT TCTTCGCCGC
GAACTGCGCG ACAAGCGCTA A
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| Protein sequence | MNALMNAEVA DRPWLKAYPA GVPADIDASQ YPSLVALMEE SFKKYRDRVA YSFMGKDITF
GETDSLSVAF GAYLQGLGLA KGDRVAIMMP NVPQYPVAVA AILRAGYVVV NVNPLYTPRE
LEHQLKDSGA KAIVIVENFA CTLEQCLANT PVRHIVLCAM GDQLGLLKGM LVNYVVRSVK
KMVPPFNLPG AVPFNDALAQ GARGALKRPA IEPDDIAVLQ YTGGTTGVSK GAVLLHRNVI
ANVLQSEAWN GPAMASLPAG EQPTYVCALP LYHIFAFTVN MMLGMRTGGK NILIPNPRDL
PAVLKELSKH KVNSFPAVNT LFNGLANHPD FNTVDWSHLK ISLGGGMAVQ SAVAKLWLQK
TGCPICEGYG LSETSPSASC NPTNSKAFAG TIGVPIPSTW FKLLDDDGHE VPPGQPGEIA
IKGPQVMAGY WQRPDETDKV MTPDGYFKSG DIGIMDENGF FKIIDRKKDM VLVSGFNVYP
NEIEDVVAKL DGVMECACVG VLDEKSGEAV KLVIVKKNPD LTEAQVRAYC KENLTGYKQP
KVVEFRTELP KTPVGKILRR ELRDKR
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