Gene Pnap_3795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3795 
Symbol 
ID4686508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4046126 
End bp4047136 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content57% 
IMG OID639836813 
Productmagnesium and cobalt transport protein CorA 
Protein accessionYP_984012 
Protein GI121606683 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.760461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATCG AAAAGCCGTC TGTCATGCTC AATATTTTCA CGCTCGCCAA TGGCCGGCTG 
TTCCAGGAAG AAATCGAATC CCTGGAAGAA CTCTCCAGGT TCCAGCCCAT CTGGGTTGAC
CTGGAATCTC CTACCCTCGA AGAAAAACGC TGGATCAAGC AGTATTACGG CTTGTCCATT
CCCGAAGATG CGATGGACGA GGACATTGAG GAGTCCGCGC GTTTTTACGA GGAAGACAAC
GGCGAGCTGC ATATCCGCTC GGACTTTCTG ATTGCCGATG AAGACGAGCC GCGCACGGTG
CGGGTGGCTT TCATCCTCAA CCTGGTCAAT GACGACCTCA AGAGCAAAGG CGTGCTGTTT
TCGATCCATG ACGAGGATGT GCCGGTGTTC AGGCTGCTGC GCATGCGCGC GCGCCGTGCG
CCGGGCCTGA TCGAGGACGC CAAGGAAGTG CTGCTCAAGC TGTTTGACGC CGATGCCGAA
TATTCCGCCG ACACGCTCGA AGGCATTTAT GTCGATCTTG AAAAAGTCAG CACCAAGGTG
CTGTCGGGCG ATGTGACCGA CGTGATGGCC GGCGAGGTGC TGGGCGCCAT CGCGCGCCAT
GAAGACCTGA GCGGGCGCAT CCGGCGCAAC GTGATGGACA CGCGGCGCGC CGTCAGCTTC
ATGATGCGCA GCAAGATGCT GAACGCCGAG CAGTTCGAGG AGGCGCGGCA GATTCTGCGC
GACATTGACT CGCTGGACTC GCACACGGCC TTCCTGTTCG ACAAGATCAA CTTTTTGATG
GATGCCACGG TCGGCTTCAT CAACATCAAC CAGAACAAGA TCATCAAGAT TTTTTCGGTG
GCCAGCGTTG CGCTGTTGCC TCCCACCCTG ATTGCCAGCG TGTACGGCAT GAATTTCAAG
CTCATGCCCG AGCTGGACTG GACGCTGGGT TATCCGTATG CGCTGGCCCT GATGATTGCC
AGCGCCGTGG TGCCGATGTG GTATTTCAGG AAACGTGGCT GGCTGCAGTA A
 
Protein sequence
MHIEKPSVML NIFTLANGRL FQEEIESLEE LSRFQPIWVD LESPTLEEKR WIKQYYGLSI 
PEDAMDEDIE ESARFYEEDN GELHIRSDFL IADEDEPRTV RVAFILNLVN DDLKSKGVLF
SIHDEDVPVF RLLRMRARRA PGLIEDAKEV LLKLFDADAE YSADTLEGIY VDLEKVSTKV
LSGDVTDVMA GEVLGAIARH EDLSGRIRRN VMDTRRAVSF MMRSKMLNAE QFEEARQILR
DIDSLDSHTA FLFDKINFLM DATVGFININ QNKIIKIFSV ASVALLPPTL IASVYGMNFK
LMPELDWTLG YPYALALMIA SAVVPMWYFR KRGWLQ