| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3791 |
|---|
| Symbol | |
|---|
| ID | 4686112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 4042938 |
|---|
| End bp | 4043396 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639836809 |
|---|
| Product | ferric uptake regulator family protein |
|---|
| Protein accession | YP_984008 |
|---|
| Protein GI | 121606679 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATGA GCAACATTGA TGAGCTGAAA AACACCGGCC TGAAGGCAAC CTTGCCACGC
CTGAAAATTC TGGAGATTTT TCAGGGCGGC AAGCAACGCC ACATGACGGC CGAAGACGTT
TTTCGCGTCT TGCTCGAAGA ACGCTCGGAC ATAGGCCTGG CCACGGTGTA TCGGGTTCTG
ATGCAGTTCG AGCAGGCAGG GCTGCTCAAC CGCAGCAATT TCGAATCCGG CAAGGCGGTG
TACGAAATCA ACGAAGGCCA ACACCACGAC CATCTGGTTT GCCTGGACTG CGGCAAGGTG
GAGGAGTTTT ATGACGCCGA GATTGAAAGG CGCCAGAACG CGGTGGCCGA ACTCAAGGGC
TTTGCCATCG CCGACCACTC GCTGTCGATT TATGCCCATT GCACCAAGAC CGACTGCCCC
AACCGGCTGG CAGCGCCCGG GCGGCACCAC CCAGCCTGA
|
|---|
| Protein sequence | MPMSNIDELK NTGLKATLPR LKILEIFQGG KQRHMTAEDV FRVLLEERSD IGLATVYRVL
MQFEQAGLLN RSNFESGKAV YEINEGQHHD HLVCLDCGKV EEFYDAEIER RQNAVAELKG
FAIADHSLSI YAHCTKTDCP NRLAAPGRHH PA
|
|---|
| |