| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3781 |
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| Symbol | |
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| ID | 4689957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4032221 |
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| End bp | 4032847 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639836799 |
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| Product | cbb3-type cytochrome c oxidase subunit II |
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| Protein accession | YP_983998 |
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| Protein GI | 121606669 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
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| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.166717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAATC AACAATCGAG CGGCGGTCTT TCCCATGAGA AGGTGGAGAC CAACAATTTT
CTGATGATCG TGCTGATCCT CATCGTGCTC GCCTTTGGCG GCCTTGTGGA GATCGTGCCC
CTGTTCTTCC AGAAGTCCAC CACGGAGCCG ATCAAAGGGC TTCAGCCCTA TACCGCGCTG
CAGGTGATAG GTCGTGACAT TTATGTGCGT GAAGGCTGCT ACAACTGCCA CTCGCAGATG
ATTCGTCCGT TCCGGGCAGA AACGCTACGC TATGGTCCCT ACTCCGTGGC TGGCGAGTCT
GTGTATGACC ATCCGTTCCA GTGGGGCAGC AAGCGCACCG GCCCGGACCT GGCACGTGTG
GGTGGCAAGT ACAGCGATGA ATGGCATCGG ATTCACTTGA ACAACCCGCG TGACCTGGTT
CCAGAATCCA ACATGCCTGC TTATTCCTGG CTGGAAAAAA CCCCGGTCGA TGATTCCTCC
ATCAAGACCC ACATGCAGGG ACTGCGTACG GTAGGCGCGC CTTACACCGA TGAGCAGATC
GCAGCGGCGC CTTCCGATGT CAAGGGGAAA ACCGAGATGG AAGCAGTGAT TGCGTATCTG
CAGGTGCTCG GAATTCACCG CAAATAA
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| Protein sequence | MANQQSSGGL SHEKVETNNF LMIVLILIVL AFGGLVEIVP LFFQKSTTEP IKGLQPYTAL
QVIGRDIYVR EGCYNCHSQM IRPFRAETLR YGPYSVAGES VYDHPFQWGS KRTGPDLARV
GGKYSDEWHR IHLNNPRDLV PESNMPAYSW LEKTPVDDSS IKTHMQGLRT VGAPYTDEQI
AAAPSDVKGK TEMEAVIAYL QVLGIHRK
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