| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3774 |
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| Symbol | |
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| ID | 4687595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4026591 |
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| End bp | 4027997 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639836792 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_983991 |
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| Protein GI | 121606662 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.46395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAC TTGCGGTCGA TTGTATGCCC ATCCCTTCTC ATGAATTGAT ACGCCGTTTT
GACGTTTCCG GCCCGCGCTA CACCTCTTAC CCGACGGCAG ACCGTTTCGT GGAAGCCTTC
ACGGCCGAAC ATGTAGCCCA GGCACTGGCC CAGCGCCGAA ACGGGGCGGC CGCCATGCTG
TTGCCACTGT CCCTTTACGT GCATATTCCT TTTTGTGAAT CGCTGTGCTA CTACTGCGCC
TGCAACAAGA TCATCACCAG GCACCATGAG CGCGGCGAAA CTTACCTGCG CTACCTCAGC
CGCGAAGTCG ATTTGTACAC GGCCCATCTC GGGGTTGGCC AAACGGTCAG CCAGTTGCAT
CTGGGAGGTG GAAGTCCCAC TTTCCTGAGT GACGGCGAGT TGCATGAATT GATGGCCATG
CTGCGGCGCA GTTTCAGCCT CGCGCCGGAC GGCGAGTACT CGATTGAAGT CGATCCGCGC
ACTGTTGATT CCGCCCGCCT GGCCGCGCTG GCGGGGCTGG GCTTTAACCG GCTGAGCTTC
GGCGTGCAGG ACTTCGATCC TGCGGTCCAA AAGGCCGTGC ATCGCGTTCA GCCTGCCGAA
CAGGTTTTTT CATTGATGGC TGCAGCTCGT CTGATGGGTT TTGAGTCCAT CAACATTGAC
CTGATCTATG GATTGCCACA ACAAACCCCG GAGTCATTTG ATCGCACATT GGCCCAGGTG
CTGCAGTTGC GGCCAGACCG TATTGCGCTG TATGCCTATG CCCATCTGCC CCAGCGCTTC
AAGCCGCAAC GCCGCATTGA TGTTGACAAA CTGCCTGATG CGGGCGCAAA GCTTTCCATG
CTGTCGCGCT CGCTTTCGGC GTTTCAGGGT GCCGGCTATG TTTATGTGGG CATGGATCAC
TTTGCCTTGC CTCATGATGC GCTGGCCGTC GCCAAACGCC AGGGGCGTCT GCACCGCAAC
TTCCAGGGCT ACAGCACCCA GCCCGACTGC GACCTGATCG GCCTGGGTGT GTCGGCCATT
GGCAAGGTAG GCGCTACCTA CAGCCAGAAT ACCAAGACCC TTGAGGAGTA TTACGACTAC
CTGGATCAGG GGCGTTTGCC GGTCGTGCGG GGTCTGGCGC TGTCTCGCGA TGACCTGGTA
CGGCGCGGCG TCATCATGGC GCTGATGTGT CAGGGACAGC TGGAGTTCGA GTCGATTGAA
CTGGCCTATT TGATTGATTT CAATAGCTAT TTCGCCGCCG AACTGGAAAT ACTGCATGGC
ATGCAGGAGC AGGGCTTGGT CGAGGTTGAC GCGACCAGTC TGCAAATTAC AAAAATGGGC
TGGTATTTCG TGCGTGGCGT GGCCATGGTG TTTGACCGCT ATCTGCAGGC TGACCGTACG
CGTGCAAGGT TTTCCCGGAT CATCTAA
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| Protein sequence | MNALAVDCMP IPSHELIRRF DVSGPRYTSY PTADRFVEAF TAEHVAQALA QRRNGAAAML
LPLSLYVHIP FCESLCYYCA CNKIITRHHE RGETYLRYLS REVDLYTAHL GVGQTVSQLH
LGGGSPTFLS DGELHELMAM LRRSFSLAPD GEYSIEVDPR TVDSARLAAL AGLGFNRLSF
GVQDFDPAVQ KAVHRVQPAE QVFSLMAAAR LMGFESINID LIYGLPQQTP ESFDRTLAQV
LQLRPDRIAL YAYAHLPQRF KPQRRIDVDK LPDAGAKLSM LSRSLSAFQG AGYVYVGMDH
FALPHDALAV AKRQGRLHRN FQGYSTQPDC DLIGLGVSAI GKVGATYSQN TKTLEEYYDY
LDQGRLPVVR GLALSRDDLV RRGVIMALMC QGQLEFESIE LAYLIDFNSY FAAELEILHG
MQEQGLVEVD ATSLQITKMG WYFVRGVAMV FDRYLQADRT RARFSRII
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