Gene Pnap_3773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3773 
Symbol 
ID4688340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4025904 
End bp4026581 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content68% 
IMG OID639836791 
Producthypothetical protein 
Protein accessionYP_983990 
Protein GI121606661 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACAT CGCTGGCCAT GACGGCATTA CTAATGGGGC TGGCCGGCGG GCCGCATTGC 
ATCGCCATGT GCGGTGCGGC CTGCGCGGGC ATCGGCAATG CAGCCGGTGC GCGTAAAACC
TCGGCCCTCT GGTCCTTCCA GGCGGGCCGG CTGGCCAGTT ATTCCCTGCT GGGTGCGGTG
GCGGCAGCGT CGATGCAGGG GCTGGGATGG CTGACCACGC AAACGGCGGT CATGCGCCCG
GTCTGGACGC TGTTTCATGT GGCCGTGATG ATGATGGGGC TGATGCTGGT GTTGCTGGCC
CGCCAGCCGG TCTGGCTCGA CCACACCGCG CGCAGCGTCT GGAGCCGGGT CAGGGCCTTC
AATGCCGCCT GGGGTCGCGG CGCGCCGCTG GCCATTGGCG CGCTCTGGGC ATTCATGCCC
TGCGGTCTGC TGTATTCGGC CGTGCTGGTA GCCGCTCTGA GCGGTGGCCC GCTCGAAGGT
GCGCTGACCA TGGCACTGTT CGCCCTGGGC AGCAGCGTGT CTCTTTTGAT TGGCCCCTGG
CTGCTGCTGC GCCTGCGGGG CAGCGGCAGC GGCGAGTGGG GGATTCGGCT GGCGGGCCTG
GCCTTGGTGG TCACTTCCGG CTGGGCCTTG TGGATGGGCT TGGCGCACAA CACGGCGCCC
TGGTGCGTCA CGCCATAA
 
Protein sequence
MQTSLAMTAL LMGLAGGPHC IAMCGAACAG IGNAAGARKT SALWSFQAGR LASYSLLGAV 
AAASMQGLGW LTTQTAVMRP VWTLFHVAVM MMGLMLVLLA RQPVWLDHTA RSVWSRVRAF
NAAWGRGAPL AIGALWAFMP CGLLYSAVLV AALSGGPLEG ALTMALFALG SSVSLLIGPW
LLLRLRGSGS GEWGIRLAGL ALVVTSGWAL WMGLAHNTAP WCVTP