Gene Pnap_3770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3770 
Symbol 
ID4687922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4023280 
End bp4023705 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content63% 
IMG OID639836788 
ProductAsnC family transcriptional regulator 
Protein accessionYP_983987 
Protein GI121606658 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAA CCGACCACCA CCTCATTTCC CTGCTGCGCC AGGATGCCCG CTTGAGCGTC 
GCCGCGCTGG CAGCCAAGCT TGGCGTCTCG CGCGGCACGG TCACCAACCG CATCCGCAAG
CTCGAAGACG ACAACGTCAT CGTCGGCTAC ACCGTTCGCC TGCGGCCCGA TGTGCAGCAC
AAGGAGATCA AGGCCTGGAT GAGCATTGCG GTGGAAGGCA ACCAGACCCG CGCCGTCATT
GCCAGCCTGC TCGGCGAGCC CGGCGTGGCC ACGCTGCATG ACACCAATGG CCGCTGGGAC
TTGCTGGCCG AGTTGCGTGC CGAAAACCTG CAGGATCTGG CCAAGGTGCT GGAACGCATC
CGCCTGCTCA AGGGCATCAG CAACACCGAA ACCAGCATTC ACCTGGAAAC CTACCGGCTA
TCGTAG
 
Protein sequence
MDETDHHLIS LLRQDARLSV AALAAKLGVS RGTVTNRIRK LEDDNVIVGY TVRLRPDVQH 
KEIKAWMSIA VEGNQTRAVI ASLLGEPGVA TLHDTNGRWD LLAELRAENL QDLAKVLERI
RLLKGISNTE TSIHLETYRL S