| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3758 |
|---|
| Symbol | |
|---|
| ID | 4689272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 4007311 |
|---|
| End bp | 4008105 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639836776 |
|---|
| Product | respiratory nitrate reductase, gamma subunit |
|---|
| Protein accession | YP_983975 |
|---|
| Protein GI | 121606646 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2181] Nitrate reductase gamma subunit |
|---|
| TIGRFAM ID | [TIGR00351] respiratory nitrate reductase, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.334737 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGC TGAACGACTT TCTGTTTGGG ATTTATCCCT ACATCTGCCT GGCGGTGTTC
CTGCTCGGCA GCCTGATCCG CTTCGACCGC GACCAGTACA CCTGGAAGAG CGACTCGTCG
CAGCTGCTGC GCGCCGGCCA GTTGCGCTGG GGCAGCAATT TGTTCCATGT GGGCGTGCTG
TTTTTGTTCT TCGGCCACAG CTTCGGCATG CTCACGCCGC ACTTCCTGTA CGAGTCCTTC
ATCAGCGCCG GCGCCAAGCA GCTGGTGGCG ATGGTCTCGG GCGGATTGTT CGGCCTGCTG
GGCTTTGTCG GCGTGAGCAT CCTGCTGCAC CGCCGCCTGC TTGACGAGCG CATCCGCATC
AACTCCAAGA CCAGCGACAT CGTGCTGCTC GTGCTGCTGT GGCTGCAGCT GGCGCTGGGC
CTGGCGACGA TTCCGCTGTC GGCGCAGCAC CTGGACGGCA GCATGATGAT GCGGCTGGCC
GGCTGGGCGC AGCACATCGT GACCTTGCAG CCCGGTGCGC CCGAGATGCT GGCCGAAGCC
GGTTTTGTCT TCAAGATGCA CATGTTCCTG GGCATGTCGA TTTTCCTGAT CTTCCCGTTC
ACCCGGCTGG TGCATGTGTG GAGCGGCTTT GCCTCGGTCG GCTACGTGCT GCGCCCTTAT
CAGGTCGTGC GCAGCCGCCG CCTGGGCGTG ACACGCCAGG CCGCATCGCG CCAGCAGCCG
CAGGACGCGC AAGCCGCCCA GACCGTCAGC CAGCCTTCAA AACCTCTCGT GAAGCCCCAA
GGTAAATTCT CATGA
|
|---|
| Protein sequence | MTALNDFLFG IYPYICLAVF LLGSLIRFDR DQYTWKSDSS QLLRAGQLRW GSNLFHVGVL
FLFFGHSFGM LTPHFLYESF ISAGAKQLVA MVSGGLFGLL GFVGVSILLH RRLLDERIRI
NSKTSDIVLL VLLWLQLALG LATIPLSAQH LDGSMMMRLA GWAQHIVTLQ PGAPEMLAEA
GFVFKMHMFL GMSIFLIFPF TRLVHVWSGF ASVGYVLRPY QVVRSRRLGV TRQAASRQQP
QDAQAAQTVS QPSKPLVKPQ GKFS
|
|---|
| |