Gene Pnap_3749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3749 
Symbol 
ID4688111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3995086 
End bp3996954 
Gene Length1869 bp 
Protein Length622 aa 
Translation table11 
GC content61% 
IMG OID639836767 
ProductK+ potassium transporter 
Protein accessionYP_983966 
Protein GI121606637 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID[TIGR00794] potassium uptake protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAGTC AAAAATCATC ACTTGCCGTG CTGACCGTGG GCGCCATCGG CGTTGTTTAC 
GGCGACATCG GCACCAGCGT CCTGTATGCC ATCAAGGAAG TCTTCGGCTC CGGCCATGTT
CCCTTTACCC CCGACAACGT GTACGGCATC CTGTCGATCT TCTTCTGGAC CCTGACCGTC
ATCGTTTCGC TGAAATACGT CTCGCTGGTG CTGCGCGCCG ACAACAACGG CGAGGGCGGG
CTGATCGCCA TGCTCGCGCT GGCCTCCACC GCCGTGCAGG ACCGGCCCGA GCTGCGCAAG
GTGCTGCTGC TGGTCGGCAT CTTCGGCACC TCGCTGTTCT ACGGCGACGG CGTCATCACG
CCGGCGATTT CCGTGCTGTC GGCGGTCGAG GGCCTGGAGG TGATTTCGCC CACCTTCACC
AAGGCGGTGA TTCCCACCAC GCTGGTCATT TTGTTTGGGC TGTTTGCGAT GCAAAAGCAC
GGCACGGCCG GCATCGGCAA GTTCTTCGGC CCGATCACCA TCGTCTGGTT TGCGGTGCTG
GCGCTGCTGG GCGTGTCCCA GATCGTGACC CATCCGGAGA TCCTGTTTGC GCTCAGCCCG
CATTACGCGC TGATGTTCAT GTGGGAAAAC CCCGGCATCA CCTTCATCAT CCTGGGCGCC
GTGGTGCTGT GCGTCACCGG CGCCGAGGCG TTGTATGCCG ACCTCGGCCA CTTCGGCAAG
AAGCCGATCC GGCTGGCCTG GTTTTCGGTG GTCATGCCGT CGCTGGTGCT CAATTATTTC
GGCCAGGGCG CGCTGCTGCT GAGCAACCCG GCGGCGGTCA AAAACCCGTT TTACCTGATG
GCGCCCGACT GGGCCCTGAT TCCGCTGGTC GTGCTGGCCA CGCTGGCCAC GGTGATCGCC
TCGCAGGCGC TGATCACCGG CGCCTTCAGC GTCACCAAGC AGGCCATCCA GATGGGCTAT
TTGCCCCGGC TGCGCATCCT GCACACCAGC GTTCGCGACA CCGGCCAGAT CTACATGCCG
TTCGTCAACT GGGGCCTGTT TGTCACCATT GTGCTGGCGG TGGTGATGTT TCGCTCTTCA
AGCAACCTGG CGGCGGCCTA CGGCATCGCG GTCTGCACCG ACATGCTGAT CACCACCATC
CTGACCTTCT ACGTGATTCG CTATGGCTGG AAGTACCCGC TGGCGCTGTG CATTGCCGCC
ACCAGCGTGT TTTTTCTCGT CGATTTCGCA TTTTTCGCGT CCAACCTGAT GAAGCTGTTC
GCCGGCGGCT GGTTCCCGCT GGTGATTGGC GGCGCGGTGT TCACGCTGAT GATCACCTGG
AAGCAAGGCC GGCAAATCCT CAATGAAAAG CTGCGCACCG ACGCGATTGA CCTGTCGAGT
TTTCTGGATG CGGTGTTTGT CAGCCCGCCC TTGCGGGTCG AGGGCACGGC CGTCTTCATG
ACCGCCGAGC CGGGCATCGT GCCCAACGCG ATGCTGCACA ACCTCAAGCA CAACAAGGTG
CTGCACGATC AAAACCTGTT TGTCACCGTG GTGAATCATG AGGTGCCGTG GATCGGCATG
GACAAGCGGC TGCAGGTGGA GTCGCTGGGC CACGACTGCT GGCAGGTGAA CATTCACTAC
GGCTTCAAGA ACGACCTGGA CCTGCCCAGG GCATTGCAGC AGATCAAAAA CCGGGGCTGC
CAGCTCGAAC CCATGACAAC GAGTTACTTT TTATCGCGCG ACACGGTGAT TCCGACCATC
GGCAGCGGCA TGGCGGCCTG GCGCGAAAAG CTGTTTGCGC AGATGCACCA CAACGCCAGT
GGCGCGGCTG ATTTCCTGAA CCTGCCGAAC AACTCGGTGG TCGAGCTGGG CAGCAAGATC
GAGATCTGA
 
Protein sequence
MTSQKSSLAV LTVGAIGVVY GDIGTSVLYA IKEVFGSGHV PFTPDNVYGI LSIFFWTLTV 
IVSLKYVSLV LRADNNGEGG LIAMLALAST AVQDRPELRK VLLLVGIFGT SLFYGDGVIT
PAISVLSAVE GLEVISPTFT KAVIPTTLVI LFGLFAMQKH GTAGIGKFFG PITIVWFAVL
ALLGVSQIVT HPEILFALSP HYALMFMWEN PGITFIILGA VVLCVTGAEA LYADLGHFGK
KPIRLAWFSV VMPSLVLNYF GQGALLLSNP AAVKNPFYLM APDWALIPLV VLATLATVIA
SQALITGAFS VTKQAIQMGY LPRLRILHTS VRDTGQIYMP FVNWGLFVTI VLAVVMFRSS
SNLAAAYGIA VCTDMLITTI LTFYVIRYGW KYPLALCIAA TSVFFLVDFA FFASNLMKLF
AGGWFPLVIG GAVFTLMITW KQGRQILNEK LRTDAIDLSS FLDAVFVSPP LRVEGTAVFM
TAEPGIVPNA MLHNLKHNKV LHDQNLFVTV VNHEVPWIGM DKRLQVESLG HDCWQVNIHY
GFKNDLDLPR ALQQIKNRGC QLEPMTTSYF LSRDTVIPTI GSGMAAWREK LFAQMHHNAS
GAADFLNLPN NSVVELGSKI EI