| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3747 |
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| Symbol | |
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| ID | 4687220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3992400 |
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| End bp | 3993464 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639836765 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_983964 |
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| Protein GI | 121606635 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.706849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.513749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTAGCA TAGCGGACAT GCACGGCTTC AAGGGCTTCA ACTGGATCAA CCGCAGGCGG
CTGGCCTGGA GCGCCTGCCT GCTGCTGGCT GGCGCGGCTC TGGCGGCGCC GCAAAAGGCG
CCCGCGCCGG TGCTGATCCG CTTCTCGCAT GTGGTGGCGC ACGACACGCC CAAGGGGCAG
ATGGCGCTAC GCTTCAAGGC GCTGGTGCAA GCGCGCTCGG GCGGGCGCCT GCGGGTCGAG
GTGTATCCCG ACTCCCAGCT GTATGGCGAT GACGACGAGA TGGAAGCCCT GCAGTTGGGC
GCCGTCGAGA TGCTGGCGCC TTCGCTGTCC AAGTTCGGCG CGGTGGGCGT CCCGGAGTTC
GAGGTGTTTG ACCTGCCTTT TTTGTTCCAC GACCTGGCGC AGGTGCGCTG CGTCACGCAA
GGCCCGACGG GCCGGCAACT GCTGGAGCGC CTGTCGCGCC AGCAAATGGT CGGGCTGGGT
TTTCTGGACA ACGGCTTCAA GCAGATGAGC GCCGGCCAGC CGGTGCAGAA CCTGCAGGAT
TTCAGGGGGC TGCGCCTGCG CGTCCAGGCT TCGCGCGTGC TGACGGCGCA AATGCGCTCG
CTGGGCGCCT ACCCGGTGGT GCTGCCGTTT GACGAAACCC AGCGCGCCCT GGCGTCCGGG
GTGGCCGATG GCGCGGAGAA CCCGCTGTCC AACTTCCTGA CGCAGCACCT GGACGCGGTC
CAGCGCGACG TGACGCTGAC CAGCCATGGC TACCTGGGTT ATGCGGTGGT GTCCAATCCG
CGTTTCTGGG CCAGCCTGGA CGATGCCGAC CGCAGCCTCC TGACGCTTGC GCTGAACGAT
GCCCTGGACG AAGGCAACCG CCTGTCTGCC CGGATGAACC AGCAGGCCCT GGCCACGCTG
CGCGAATCCT CCGGCGTGCG GCTGCATGCG CTGTCGGCCG CGCAGCGCAG CGCCATGCGC
CGCGCGGTGC AGCCGGCGTA TGACGACTTC GAGCGCCGGG TCGGCCGGGC GCTGCTGCGC
CAGGTGCAGC GCGACTGCCT GTTTCAAGAC CAAGACCTAG GGTAA
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| Protein sequence | MSSIADMHGF KGFNWINRRR LAWSACLLLA GAALAAPQKA PAPVLIRFSH VVAHDTPKGQ
MALRFKALVQ ARSGGRLRVE VYPDSQLYGD DDEMEALQLG AVEMLAPSLS KFGAVGVPEF
EVFDLPFLFH DLAQVRCVTQ GPTGRQLLER LSRQQMVGLG FLDNGFKQMS AGQPVQNLQD
FRGLRLRVQA SRVLTAQMRS LGAYPVVLPF DETQRALASG VADGAENPLS NFLTQHLDAV
QRDVTLTSHG YLGYAVVSNP RFWASLDDAD RSLLTLALND ALDEGNRLSA RMNQQALATL
RESSGVRLHA LSAAQRSAMR RAVQPAYDDF ERRVGRALLR QVQRDCLFQD QDLG
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