| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3746 |
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| Symbol | |
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| ID | 4687390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3990405 |
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| End bp | 3992384 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639836764 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_983963 |
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| Protein GI | 121606634 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.445136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGC CCTCCATCGA CTTCGCGGTC CTCGACCTGG ACACCCGCCA GCTGTCGGTG
CTGAACCGCC GCGCCATGGC CTGGCTGGTC GGCATGCTGC TGCTGGTCAC CGTGTCCATC
GTGCTGCTGG CGCTGTTCCT GCGCACGGTG GAGGCGCAGG AAGAAGACCG CCGCCGCACC
GCCGATGCCC AGTGGCTGGA CCAGACCGTG CGCTTTCACC TGCGCCGCCT GGAGGCCGAC
CTGGGGGTGC TGGCGCTGCA GGTGCAGCGC AGCGAGGAGC CGGCGCCGCC CGCGCTGCCG
GGCGGGCAGC TCTGGAGAAG CGCGCAGGCC ATCGCCTGGC ATGGCTGGCT GGCGGCGGAC
CGGCAGCCCG CTGTTGCCGC CTGGCCGCCG TTCCTGCAGT CCGCAGCGCG GCATCCCGAC
AGCGCCGAAG CGCTTTCCGC CATGCTCAAG ACCACCCGGG GCCTGCAGCG CGCGGCCTAT
GCCGGCCCCT TGCCGCAGGC CGGCGACTCT GCGGTGCAGA TGCTGTGGCT GGCGGTTCCG
GTGTTCGAGC GCGACCGTTT CCTGGGCGAC TACGTGGCCG CCATCCGCTT CGACCGGCTG
CTGGACAGCG TGATTCCGCC CTGGTTCTTC AAGGACCACG CCGTGGCGCT GGACGCCGAT
GCCCTTCCTG TCGCTGCTGC ACCGCCGGAC AAACCGTCGC TTTACGTCGC GCCCGTCAAC
CTGCCGGGCG CACCCTTGCG CTTGCGGGTT GACGCGTTGA ACAGCCGCCC GGCCCTGGCG
CCGCGCATCT TTTTCGGCAT CGCGCTGGCC TGCCTGGCGG GCATGGTGGT GGCGCTTTAT
TTTTTGCGGC GCGACACCGC CCGGCGCCAG CGGGCCGAAT CGCAGCTGCA AACCCAGATG
GCGCTGCGCA CCGCCATGGA GCGCTCGGTC ACGCTCGGCC TGCGCGCCTG GAACCCCGAC
GGGCGACTGC TCTACGCCAA CCAGACCTTT TGCCGCATGG TGGGCCTGGC GCCCAGCGAC
ATCCTCGGCC ATGCGGAGGC GATGCCCTAC TGGCCGGCCG GGCAGGGCGA TGAATTCGAG
TTGCTGCTGC AAAGCGCGCG CCTGCCCATG GCGCAGCAGG TCGGCGTCGA GATGCAGCTG
CGCCACAGCC AGGGCCATCT GCTCGATGTG CTGGCGCATG GCGCGCCGCT GACGCTGGGC
GATGGCCGGG TGATTGGCTG GATGGGCTCG GTGCTGGACA TCACCGAGCG CAAGCGCGTC
GAGCGGCTGG CCGCGCGCCG GCAGGAGCTG CTCGAAGCCT CCGGCCGCCT GATTGCGGTC
GGCGAGGTGG CCTCGACCCT GGCGCACGAA CTCAACCAGC CCCTGGGCGC GCTCAGCAGC
TTTGCCAACG GCCTGCTCAA CCGGATGCGC GCCGGCACCT TGACGCTGGC GGAAGTCACG
CCCGTGGTCG AGCGCATGGA GCGCCTGGCG GAAAAGGCCG GGCGCGTGAT CCAGCGCGTC
AACGCCTTCG CCCGGCGGCA GGAAATGAGC TTGCAGCCGC TGGCGCTCAA TGAATTCATC
GCGCGCGTCG CGGGCCAGGT GCCGCTGCCG GACGGCCTGG AGCTGCAATT GCGCCTGCCG
GAGCAGCCGC TGACCTTGCC CGCCGACGCG CTGCTGCTGG AGCACGCGCT GCACAACCTG
GTGCTCAACG CCACCGAATG GGCCGTCCAC GGCGGCCAGC GCCCGGCCCG CGTGCGCATC
AGCCTGGAGC AGGACGGCGG CCTGGCGGGC ATCCGGGTGG AAGACAGCGG CCCGGGCGTT
CCCCCTGAGC AGCGCAACCG CATCTTTGAC GCCTTTGCCA GCCAGAAAAC CGGCGGCATG
GGCATGGGGC TGTCGATCTG CCGCTCCATC ATCGAAGCGC ACCACGGCCG CATCGATGTC
GCCACCAGCG ACGAGCTGAA CGGCGCACAA TTTACGGTCT GGCTGCCCTT GACCCCGTAA
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| Protein sequence | MTEPSIDFAV LDLDTRQLSV LNRRAMAWLV GMLLLVTVSI VLLALFLRTV EAQEEDRRRT
ADAQWLDQTV RFHLRRLEAD LGVLALQVQR SEEPAPPALP GGQLWRSAQA IAWHGWLAAD
RQPAVAAWPP FLQSAARHPD SAEALSAMLK TTRGLQRAAY AGPLPQAGDS AVQMLWLAVP
VFERDRFLGD YVAAIRFDRL LDSVIPPWFF KDHAVALDAD ALPVAAAPPD KPSLYVAPVN
LPGAPLRLRV DALNSRPALA PRIFFGIALA CLAGMVVALY FLRRDTARRQ RAESQLQTQM
ALRTAMERSV TLGLRAWNPD GRLLYANQTF CRMVGLAPSD ILGHAEAMPY WPAGQGDEFE
LLLQSARLPM AQQVGVEMQL RHSQGHLLDV LAHGAPLTLG DGRVIGWMGS VLDITERKRV
ERLAARRQEL LEASGRLIAV GEVASTLAHE LNQPLGALSS FANGLLNRMR AGTLTLAEVT
PVVERMERLA EKAGRVIQRV NAFARRQEMS LQPLALNEFI ARVAGQVPLP DGLELQLRLP
EQPLTLPADA LLLEHALHNL VLNATEWAVH GGQRPARVRI SLEQDGGLAG IRVEDSGPGV
PPEQRNRIFD AFASQKTGGM GMGLSICRSI IEAHHGRIDV ATSDELNGAQ FTVWLPLTP
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