Gene Pnap_3732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3732 
Symbol 
ID4689769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3975145 
End bp3975963 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content70% 
IMG OID639836750 
Productrestriction endonuclease 
Protein accessionYP_983949 
Protein GI121606620 
COG category[V] Defense mechanisms 
COG ID[COG1715] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.389352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0107357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTAC GTGAAAAGCC AGGCCTGCCC CGAGCCTTGA TCGGGCTGGC CGCGCGCCTG 
CCCTGGTGGC TGGGGCTGGT GCTGGCCGTG ATCAGCTATG CAGGCCTGCA CCATCTGGCG
CAAAAACCGA TGCCGGCGGC CCTGCAGCCG GGGCAGATGG GCAGCTTTTT GCTGTCGGCG
GCGGCGCACG GGCTGGCGCT GGCCGGCCAA TACCTGCTGC CCGTGTTTTT CGCAGCAGGC
GCGCTGATCT CGGCCTTCAG GCGGGGCAAG GCCGCGCGGC TTTATTCCGC CGCCACCACG
CGCGCCGGCG CCATCGACGC CATGAGCTGG CAGGAGTTTG AAATCCTGGT GGGCGAGTAT
TTCCGCCGCC AGGGCTTTGG CGTGCTGGAC AACGGCGGCG GCGGCGCCGA TGGCGGCGTC
GATGTGGTGC TGCACGGTAG CGACGGCAGC TACCTGGTGC AATGCAAGCA CTGGCGCGCG
CTGCGCGTGG GCGTGCAGCC GGTGCGCGAG TTGTACGGCG TGATGGCGGC CCATGGCGCG
GCGGGCGGCT TTGTCGTCAC CTCGGGCGAC TTCACCGAAG AGGCGGTGCG CTTTGCCGAC
GGCCTGGCGC TGACGCTGGT CAATGGCAGA ACGCTGATGC GCGACATCCA GGCGCACAAG
GCCAGCGGCC CGGCCGGCCT GTCAGCGCCC GGTTGCCCGC TGTGCGGCGC GGCCATGGTG
CTGCGCCAGG CGCGCAGCGG CGCCAACGCC GGCAAGCAGT TCTGGGGCTG CAGCCGCTAT
GCGCAAGACC GCTGCCGGGG CACGCGCGAG GTCGATTGA
 
Protein sequence
MQLREKPGLP RALIGLAARL PWWLGLVLAV ISYAGLHHLA QKPMPAALQP GQMGSFLLSA 
AAHGLALAGQ YLLPVFFAAG ALISAFRRGK AARLYSAATT RAGAIDAMSW QEFEILVGEY
FRRQGFGVLD NGGGGADGGV DVVLHGSDGS YLVQCKHWRA LRVGVQPVRE LYGVMAAHGA
AGGFVVTSGD FTEEAVRFAD GLALTLVNGR TLMRDIQAHK ASGPAGLSAP GCPLCGAAMV
LRQARSGANA GKQFWGCSRY AQDRCRGTRE VD