Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3732 |
Symbol | |
ID | 4689769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3975145 |
End bp | 3975963 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639836750 |
Product | restriction endonuclease |
Protein accession | YP_983949 |
Protein GI | 121606620 |
COG category | [V] Defense mechanisms |
COG ID | [COG1715] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.389352 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0107357 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTAC GTGAAAAGCC AGGCCTGCCC CGAGCCTTGA TCGGGCTGGC CGCGCGCCTG CCCTGGTGGC TGGGGCTGGT GCTGGCCGTG ATCAGCTATG CAGGCCTGCA CCATCTGGCG CAAAAACCGA TGCCGGCGGC CCTGCAGCCG GGGCAGATGG GCAGCTTTTT GCTGTCGGCG GCGGCGCACG GGCTGGCGCT GGCCGGCCAA TACCTGCTGC CCGTGTTTTT CGCAGCAGGC GCGCTGATCT CGGCCTTCAG GCGGGGCAAG GCCGCGCGGC TTTATTCCGC CGCCACCACG CGCGCCGGCG CCATCGACGC CATGAGCTGG CAGGAGTTTG AAATCCTGGT GGGCGAGTAT TTCCGCCGCC AGGGCTTTGG CGTGCTGGAC AACGGCGGCG GCGGCGCCGA TGGCGGCGTC GATGTGGTGC TGCACGGTAG CGACGGCAGC TACCTGGTGC AATGCAAGCA CTGGCGCGCG CTGCGCGTGG GCGTGCAGCC GGTGCGCGAG TTGTACGGCG TGATGGCGGC CCATGGCGCG GCGGGCGGCT TTGTCGTCAC CTCGGGCGAC TTCACCGAAG AGGCGGTGCG CTTTGCCGAC GGCCTGGCGC TGACGCTGGT CAATGGCAGA ACGCTGATGC GCGACATCCA GGCGCACAAG GCCAGCGGCC CGGCCGGCCT GTCAGCGCCC GGTTGCCCGC TGTGCGGCGC GGCCATGGTG CTGCGCCAGG CGCGCAGCGG CGCCAACGCC GGCAAGCAGT TCTGGGGCTG CAGCCGCTAT GCGCAAGACC GCTGCCGGGG CACGCGCGAG GTCGATTGA
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Protein sequence | MQLREKPGLP RALIGLAARL PWWLGLVLAV ISYAGLHHLA QKPMPAALQP GQMGSFLLSA AAHGLALAGQ YLLPVFFAAG ALISAFRRGK AARLYSAATT RAGAIDAMSW QEFEILVGEY FRRQGFGVLD NGGGGADGGV DVVLHGSDGS YLVQCKHWRA LRVGVQPVRE LYGVMAAHGA AGGFVVTSGD FTEEAVRFAD GLALTLVNGR TLMRDIQAHK ASGPAGLSAP GCPLCGAAMV LRQARSGANA GKQFWGCSRY AQDRCRGTRE VD
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