| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3722 |
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| Symbol | |
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| ID | 4687590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3963467 |
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| End bp | 3964285 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639836740 |
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| Product | SecC motif-containing protein |
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| Protein accession | YP_983939 |
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| Protein GI | 121606610 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000837198 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00531296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACAAATT CAAACCTCAC CCCAGCCACC TCCGCCGACA CTGCGTGGAT GGAAACCGAA
GCCTTCGACG AACTCGACGC CATCCTGGAC GACCTGCGCA GCCGCTACGA CGAAACGCCG
CAGTGGGAAT TCTGCGAAGG CTTCATGGCC GCAGTGATCT GCTCGCGCCG CCCGATTCCT
GACTACGAAT ACCTCGGCGT GCTGCTCGGC CTGCCGGTCG AGGGCGAGGA GCCCGACGAA
GACAGCGGCT CGTTTGCCAG CGACGAACAG CGCGAACGCT TCATCGCCCT GTGGAAGCAG
CGCTGGAACG AAGTTGAAAC CGCGCTCGAT GCCGAAGTCG ATTCGCTCGA AGACGACGCC
TGCTACCACC CCGAAGTCAT GGACATTCGC GGCGTGGTGG CCGACATGCC GCCCGAGGAA
CAGGCTGCGT TCGCCAAGGC AGACCTGCCC GCGTTCGCGC AGGTGTGGGC GCTGGGCTTC
ATGTTCGCGG TCGAAAGCTG GTCCGACGAA TGGGCCGCCC CGCGCGACAA GGACGCCGCC
AAGTGGCTGG ATGGCGCGCT GCAGGCCATC GTCGCCATGA CCGAGGACGA CACTGGCGCA
CCCGAAGTCT CGCCGCTGAG CGAGGAAGGC ACGCCGAGCA CCAGCATCGC CCGGCTCAAT
GCCTTCGGCG AAGCCATCTG GGCGGTGTAC GACCTGCGCG AGCTGTGGAA GACCATGGGG
CCGAAGGTCG AAACCATCCG CAAGGAAGCC ACGCCGGGGC GCAATGATCC TTGCTCTTGC
GGGAGTGGGA AGAAGTACAA AAAGTGCTGC GGGGCTTGA
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| Protein sequence | MTNSNLTPAT SADTAWMETE AFDELDAILD DLRSRYDETP QWEFCEGFMA AVICSRRPIP
DYEYLGVLLG LPVEGEEPDE DSGSFASDEQ RERFIALWKQ RWNEVETALD AEVDSLEDDA
CYHPEVMDIR GVVADMPPEE QAAFAKADLP AFAQVWALGF MFAVESWSDE WAAPRDKDAA
KWLDGALQAI VAMTEDDTGA PEVSPLSEEG TPSTSIARLN AFGEAIWAVY DLRELWKTMG
PKVETIRKEA TPGRNDPCSC GSGKKYKKCC GA
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