Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3721 |
Symbol | |
ID | 4688436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3962683 |
End bp | 3963375 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639836739 |
Product | NUDIX hydrolase |
Protein accession | YP_983938 |
Protein GI | 121606609 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000111164 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00513627 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGAAAGGC CGCTGACCAC GGTCGATGTG GTGATCTTCA CCGTGCTGGA CGGCCAGTTG CAGGTCTTGC TGGTCAGGCG CCCTGACGGG CCGGAAGAGC CTTTTCCGAA TGCCTGGGCC TTGCCGGGCG GCTTTGTCGA TGTCCGGCGG GACGATTCGC TCGAAAGCTG TGCCCGGCGC AAGCTGCTCG CCAAGACCGG CGTCAGCAGC CCCTACCTGG AGCAGCTGGG CAGCTGGGGC GGCCGGGCTC GCGACCCGCG CGGCTGGTCC GCCACGCATG CCTACTTTGC CCTGCTGCCT GCGGATTGCG TGCAGCTGAA GCAAGAGGAA GGCAAATTCG CCCAGTGGCA TCCCGTCAAT GAACTGCCGC CCGGCCAGCC GCTGGCCTTC GACCATGCCG GCATCCTGCA GGCCGCGCTG GAGCGCCTCA GAAGCAAGGT CGAATACACC TCGCTGCCGG CCTTTTTGCT GCCCGAGCCC TTCACCCTGC CGCAGTTGCA AAAGGTGTAT GAAATCGTGC TGGGCCGCCC GGTGGACAAG AGCGGCTTTC GCACCCGCGC CCTGGCGGCC GGTTTTCTGG ACGAGCAGGG GTTGCTGGAT GTGGGCTCGC CCCGGCCGGC GATGGGCTAC CGCCTGAAGG ACAGGGCGGC GGCGGTGTAT TTCCCGAGGC CGTTCAGCCC CAGGAGCAGT TAA
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Protein sequence | MERPLTTVDV VIFTVLDGQL QVLLVRRPDG PEEPFPNAWA LPGGFVDVRR DDSLESCARR KLLAKTGVSS PYLEQLGSWG GRARDPRGWS ATHAYFALLP ADCVQLKQEE GKFAQWHPVN ELPPGQPLAF DHAGILQAAL ERLRSKVEYT SLPAFLLPEP FTLPQLQKVY EIVLGRPVDK SGFRTRALAA GFLDEQGLLD VGSPRPAMGY RLKDRAAAVY FPRPFSPRSS
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