Gene Pnap_3721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3721 
Symbol 
ID4688436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3962683 
End bp3963375 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content67% 
IMG OID639836739 
ProductNUDIX hydrolase 
Protein accessionYP_983938 
Protein GI121606609 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000111164 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00513627 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAAAGGC CGCTGACCAC GGTCGATGTG GTGATCTTCA CCGTGCTGGA CGGCCAGTTG 
CAGGTCTTGC TGGTCAGGCG CCCTGACGGG CCGGAAGAGC CTTTTCCGAA TGCCTGGGCC
TTGCCGGGCG GCTTTGTCGA TGTCCGGCGG GACGATTCGC TCGAAAGCTG TGCCCGGCGC
AAGCTGCTCG CCAAGACCGG CGTCAGCAGC CCCTACCTGG AGCAGCTGGG CAGCTGGGGC
GGCCGGGCTC GCGACCCGCG CGGCTGGTCC GCCACGCATG CCTACTTTGC CCTGCTGCCT
GCGGATTGCG TGCAGCTGAA GCAAGAGGAA GGCAAATTCG CCCAGTGGCA TCCCGTCAAT
GAACTGCCGC CCGGCCAGCC GCTGGCCTTC GACCATGCCG GCATCCTGCA GGCCGCGCTG
GAGCGCCTCA GAAGCAAGGT CGAATACACC TCGCTGCCGG CCTTTTTGCT GCCCGAGCCC
TTCACCCTGC CGCAGTTGCA AAAGGTGTAT GAAATCGTGC TGGGCCGCCC GGTGGACAAG
AGCGGCTTTC GCACCCGCGC CCTGGCGGCC GGTTTTCTGG ACGAGCAGGG GTTGCTGGAT
GTGGGCTCGC CCCGGCCGGC GATGGGCTAC CGCCTGAAGG ACAGGGCGGC GGCGGTGTAT
TTCCCGAGGC CGTTCAGCCC CAGGAGCAGT TAA
 
Protein sequence
MERPLTTVDV VIFTVLDGQL QVLLVRRPDG PEEPFPNAWA LPGGFVDVRR DDSLESCARR 
KLLAKTGVSS PYLEQLGSWG GRARDPRGWS ATHAYFALLP ADCVQLKQEE GKFAQWHPVN
ELPPGQPLAF DHAGILQAAL ERLRSKVEYT SLPAFLLPEP FTLPQLQKVY EIVLGRPVDK
SGFRTRALAA GFLDEQGLLD VGSPRPAMGY RLKDRAAAVY FPRPFSPRSS