Gene Pnap_3720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3720 
Symbol 
ID4687683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3961670 
End bp3962551 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content68% 
IMG OID639836738 
Producthypothetical protein 
Protein accessionYP_983937 
Protein GI121606608 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000274124 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0114353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCCC GCCGCCTCAT GAAGAAAAAC ATTCAGCTTC TCCTCATCGA CCCGCAAAAC 
GACTTTTGCG ACTTGCCCGC CGACTGGTGC CCGCTCGACC CCCTGACCGG GCAGGCGCTT
GCTCCGGCGC TGCCGGTCGC CGGCGCGCAT GCGGACATGC TGCGCCTGGC CGGGCTGATC
CGCGAAGGCG CGCCCGGCAT CTCGGCCATC GCGCTGACGC TGGACTCGCA CCACCGGTTT
GATATCGCCC ACCCGACCTT CTGGCAAACC GGCGCGGGCG GCAGCGTCAG CCCGTTCACG
CCGATTGCGG CGGCCCAGGT GCGCGATGGC AGCTATGCGC CCAAAGACCC CTTGATGCTT
CCCAGGGCGC TGGCCTACCT GGACGCACTG GAGCAGCGCG GCCGCTACAC CCTGATGGTC
TGGCCGGTGC ATTGCGAAAT CGGCAGTTGG GGCCACGCCA TCCACCTGGC CGTCAAGGCG
GCCTGCAACC GCTGGGAAGA CAGGAATCTG GCCGTGGCGC GCAAAATCAG CAAGGGCAGC
AACCCCTGGA CCGAGCACTA CAGCGCCCTG CAGGCCGAGG TTCCCGACGC GGGCGATGCC
GCGACCCAGC TCAACCGGGC GTTCATCGCC GAACTGGACC GCGCCGACCA GATCATCATT
GCCGGCGAGG CCAGCAGCCA CTGCGTGAAA GCGACGACCG AGCACCTGAT CGACCACCTG
CCTTCCGGCC AGAGCAGCAA AGTGGTGCTG CTGACCGACT GCATGAGCCC TGTCGGCGGC
TTCGAGGCGC AGCACCGTGC CTTTCTGGCG GATATGGCCA GTCGCGGCGT GCGGCTGGCC
ACCAGCGCCG AAATACTTCC CGCCCTGGCA GACAACGCCT GA
 
Protein sequence
MPARRLMKKN IQLLLIDPQN DFCDLPADWC PLDPLTGQAL APALPVAGAH ADMLRLAGLI 
REGAPGISAI ALTLDSHHRF DIAHPTFWQT GAGGSVSPFT PIAAAQVRDG SYAPKDPLML
PRALAYLDAL EQRGRYTLMV WPVHCEIGSW GHAIHLAVKA ACNRWEDRNL AVARKISKGS
NPWTEHYSAL QAEVPDAGDA ATQLNRAFIA ELDRADQIII AGEASSHCVK ATTEHLIDHL
PSGQSSKVVL LTDCMSPVGG FEAQHRAFLA DMASRGVRLA TSAEILPALA DNA