Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3719 |
Symbol | |
ID | 4687756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3960443 |
End bp | 3961636 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639836737 |
Product | nicotinate phosphoribosyltransferase |
Protein accession | YP_983936 |
Protein GI | 121606607 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
TIGRFAM ID | [TIGR01514] nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00517667 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0126108 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCCA TCATTCAAAG CCTGCTGGAC ACCGACCTGT ACAAGTTCAC GATGTGGCAA ACCATGCTGC ACCGCCATCC GCAGACGCAG GCCGAGTACA GCTTTGTCTG CCGCAACCAG CCGGGCTATC CGCTGGCTGA ACTGCTGCCC GAGGTCAACG AGCAGCTCGA CCACCTCTGC AGCCTGCGCT TTGAGCCGGA AGAATTGCGC TACCTGCGCG GGCTGCGCTT CATCAAAAGC GACTTTGCCG ATTTTTTGCG GATTTTCCAG TTCCAGCGGG AGTTCATCTC GGCGCGGGCC GACGGCCAGT CGCTGGTCAT TCAGGCGACC GGCCCCCAGG TGCATGTGAT GGCGTTTGAA ATCTTTGTGC TGTCCATCGT CAACGAGCTG TATTTCCGCC GCTTCGACCA GCCGGCCGCC TTGGCGCAGG GCCGCCAGCG CCTGCGGGAC AAGATAGCGC TGCTGCGGGA CTTCGGAACA GAACCGGCCC TGCGCCATCC GTTCGAGTTT TTCGATTTCG GCGTGCGGCG CCGCTTCTCG CGCGACTGGC AGACCGAGGT GGTCCGCACG CTGCAGCGCG AGCTGCCGGA CTATTTCAAG GGAACTTCGA ATGTGCTGCT GGCCAAAACG CTGGACCTCG TGCCGATTGG CACCATGGCC CACGAATACC TGCAGACCTA CCAGGCGCTG GGCATGACGC TGCGTGACTT CCAGCGCGCC GCGCTGGAAG ACTGGGTGCA GGAGTACCGG GGCGACCTGG GCGTGGCGCT GACCGATGTC GTCGGCATGG ACGCCTTCCT GGCCGATTTC GACCTCTACT TCGCCAAGCT GTTCGACGGC CTGCGCCATG ATTCGGGCGA CCCGTTTGTC TGGGGCGAAA AGGCCCTGGC CCACTACGCC AGGCTGCGCG TGGACGCGCA CAACAAGCGG CTGGTGTTCT CGGACGGGCT CGATGTACAC GCCGCGCTCG GGCTGTACCG CGCCTTTGCC AATCGGACCC AGACCGGCTT CGGCATCGGC ACGAATCTGA GCAACGACAT GGGGCTGACG CCGCTGAACA TCGTGATGAA GCTGACCGGC TGCAATGGCC GGCCGGTGGC CAAGCTGTCC GACAGCCCCG GCAAGACCCT GTGCGACAAC CCCACCTTCC TGGCCTATCT GCGGCAGGTC TTCAATGTCC CGTCAACCCT CTGA
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Protein sequence | MQAIIQSLLD TDLYKFTMWQ TMLHRHPQTQ AEYSFVCRNQ PGYPLAELLP EVNEQLDHLC SLRFEPEELR YLRGLRFIKS DFADFLRIFQ FQREFISARA DGQSLVIQAT GPQVHVMAFE IFVLSIVNEL YFRRFDQPAA LAQGRQRLRD KIALLRDFGT EPALRHPFEF FDFGVRRRFS RDWQTEVVRT LQRELPDYFK GTSNVLLAKT LDLVPIGTMA HEYLQTYQAL GMTLRDFQRA ALEDWVQEYR GDLGVALTDV VGMDAFLADF DLYFAKLFDG LRHDSGDPFV WGEKALAHYA RLRVDAHNKR LVFSDGLDVH AALGLYRAFA NRTQTGFGIG TNLSNDMGLT PLNIVMKLTG CNGRPVAKLS DSPGKTLCDN PTFLAYLRQV FNVPSTL
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