Gene Pnap_3715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3715 
Symbol 
ID4688814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3956983 
End bp3957369 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content60% 
IMG OID639836733 
ProductPilT domain-containing protein 
Protein accessionYP_983932 
Protein GI121606603 
COG category[S] Function unknown 
COG ID[COG3744] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0601342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTTGC TTCTGGACAC GCATGCCTTG CTCTGGTGGT GGACCGACGA CAAGCAGCTC 
TCAGGCACCG CGCGCAAAGC GATTGCCGAG GAAGACAACA CGGTGCTGGT CAGTGCGGCC
AGCGTGTGGG AAATCTCGAC CAAGTTCAGG CTGGGCAAGC TCGCCATCGC GCAGGCCGCG
CTCAAGCAGT TCCAGGCATT GATCGAAGCC GATGGCTTTG AACATCTGCC CATCACCTGG
CAGCACAGCC TGCTGGCCGG CGGCTACCCG CATGAACACC GCGACCCGTT TGACCGGATG
CTGGCGGCGC AAAGCGAAAT TGAAAAAGCA ACGCTGGTGA CCTGCGATGC TGCTTTTGGC
GCCTTCAATA CGGCTGTTCT CTGGTAG
 
Protein sequence
MRLLLDTHAL LWWWTDDKQL SGTARKAIAE EDNTVLVSAA SVWEISTKFR LGKLAIAQAA 
LKQFQALIEA DGFEHLPITW QHSLLAGGYP HEHRDPFDRM LAAQSEIEKA TLVTCDAAFG
AFNTAVLW