Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3705 |
Symbol | |
ID | 4689256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3945047 |
End bp | 3948364 |
Gene Length | 3318 bp |
Protein Length | 1105 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639836723 |
Product | filamentous haemagglutinin outer membrane protein |
Protein accession | YP_983922 |
Protein GI | 121606593 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.249518 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCACA TTCACCGCTC CATCTGGAAC GACCAGACCG GCACTTTTGT TGCCGTTTCA GAAAACACCC GCAGCGCCGG CAAGAAAATC TCGTCCTGCG CCTCGGCGGC TGGCGGCGGC GCCCACTTCG GCCTGAAAAC CCTGGCGGTT TGCCTGATGC TGGCCTGCGG TGCGGGCGTG CATGCCCAGC CCACGGGCGG CGTGGTGTCG GCGGGCAGCG CCACCATTGG CGGCACGCCA GGCGCCATGA CCATCACCCA GACCACGCCC AACGTGGCGA TCAACTGGCA GAGCTTTGGC ATCAGGGCCG GCGAGTCGGT CCAGTTCGTG CAGCCGGGCA GCAACTCGGT CGCGCTCAAC CGGGTCGTCG GCGCCGATCC TTCGAGCATC CTGGGCAGCT TGAGTTCCAA CGGCAAGGTG TTCCTGGTCA ACCCGAACGG CATCTTGTTC GGCCAGGGCG CGTCGGTCAA CGTGGGCGGG CTGGTGGCGT CCACCCTGGC GATCAGCGAT GCCAATTTCA TGGCGCGCAA CTACCAGTTT TCCGGCGCCG GCACGGGCAG CGTGGTGAAC CAGGGGGCGA TCAACGCCGC CAGCGGCGGC TACGTGGCCC TGCTGGGCGC GAACGTCAGC AACCAGGGCG TGATTGCGGC CCAGCTGGGC ACCGTGGCGC TGGCTGCGGG CAACGCCGTC ACGCTTGACG TTGCAGGCGA CAAGCTCTTG AGCGTCACGG TCGATCAGGG CGCAGTCAAC GCGCTGGTTG ACAACGGCGG CCTGCTCCGG GCCGACGGCG GCCAAGTGCT GATGACCACC CAGGCAGCGG GCAGCCTGCT GTCCAACGCG GTCAACAACA CCGGCGTGGT GCAGGCGCAG ACGCTGCAAA ACGTCAACGG CACCATCAAG CTGCTGGGCG GCATGGAAAA CGGCACGGTC AGCGCAGGCG GCACACTGGA CGCTTCCGGC ACAGGCGCGG GTCAGACGGG CGGCAGCGTC ACGGTGACCG GCCATCACGC CGGCCTGTTT GGCGGGCAGG TCAATGCCTC CGGCGACGCA GGCGGCGGCA CCGTGCTGAT CGGCGGCGAC TACCAGGGTA AAAACCCCGC CGTCCAGAAC GCCGCAGCGA CCTACATGAG CGCCGACGCC AGCATCCGCG CCGACGCCAT CACCAGCGGC AACGGCGGCA AGGTCGTGCT GTGGGGCAAT GACTCGACAC GCGCTTACGG CAGCATCACA GCGCGCGGCG GCGCACAGGG CGGCAACGGC GGCTTGATCG AAACTTCCGG CCATGCGCTG GACGTGGCGG GCATCCAGAT CAACGCCTCC GCCGCCAACG GCCTGGCCGG CCTGTGGCTG CTCGACCCAG CCGATGTGAC GATCACGAAT GCGGCCACCA GCGGCGGAAC CTTGACCGGC AACGTCTTCA CCCCGAACCC CAGCGCCAGC ACGGCCAATG TGAATGTCGC CGACATCGTG ACCGCACTGA CCGCCGGCAC CAACGTCACC ATCACCACAG CCAACACCAG TGGAGCCGGC AATGGCGATA TCACCGTTGA CACGCCCATC ACCTGGACCA AAACGCCGGG CGCCTTACCC GTCTCAACGC TGACCCTGAA TGCCGTTCAG GATGTGATCG TGAACGAGGC GATTACCGCC ACTTGGGGAA GCCTGGTCAC GACGGCCGGA CGTGATGTGA CGCTGTTTGC GCCCGTCACG ACGACCAACG GCAGCTTTAC GGCAAACGCC GGGCGCGACG TCAACCTCGT GAATAACGCT GCGCATCCCT TGACGGCGAT TACGACGACC GATGGAAATT TCAGGGCGAA CGCCGGAGGC AATGTGAACG TCGAGACGGT CGCCTTGACG ACAACCCGGG GTAACCTGAT CCTGGTGGCC GGTATAGATG GCAACACCAG CGGCAGTGTC GTTTTTGCGG CTGGCACCCC CGTGGCTGCC GTCACAGGCC CAAATGCAGC GGTCATGATT TACAACCCGA TAGGAACGCC ACCGACGGAT TATTCGGGTA ACTTTACGTT GACTTCTGGC GCCACGCTGA CGTCAGGTGT CTTTTTGCCA GGGATTCCGG GTGCTACGGG TGCTACGGGT GGCGTTGGCG CCACGGGCGC GACCGGGGCC ACGGGCACGA CCGGTGCGAC CGGCGGCGTT GGCGCGACCG GTACGACCGG GGCCACGGGA ACGACCGGCG GCGTTGGCGC GACCGGCGCA ACCGGGGCCA CGGGAACAAC CGGCGGCGTT GGCGCGACCG GCGCAACCGG GGCCACGGGA ACAACCGGCG GCGTTGGCGC GACCGGTACG ACCGGGGCCA CGGGAACGAC CGGCGGCGTT GGCGCGACCG GCGCAACCGG GGCCACGGGA ACAACCGGCG GCGTTGGCGC GACCGGTACG ACCGGGGCCA CGGGAACGAC CGGCGGCGTT GGCGCGACCG GCGCGACCGG GGCCACGGGA ACGACCGGCG GCGTTGGCGC GACCGGCGCG ACCGGGGCCA CGGGAACGAC CGGCGGCGTT GGCGCGACCG GCGCGACCGG GGCCACGGGA ACGACCGGCG GCGTTGGCGC GACCGGTGCG ACCGGGGCCA CGGGAACGAC CGGCGGCGTT GGCGCAACCG GTGCGACCGG GGCCACGGGA ACGACCGGCG GCGTTGGCGC AACCGGTGCG ACCGGGGCCA CGGGAACGAC CGGCGGCGTT GGCGCAACCG GCGCGACCGG GGCCACGGGA ACGACCGGCG GCGTTGGCGC AACCGGCGCA ACCGGGGCCA CGGGAACGAC CGGCGGCGTT GGCGCAACCG GCGCAACCGG GGCGACCGGT GCCACGGGAA CAACCGGCGG CGTTGGCGCG ACCGGTGCGA CCGGTGCGAC CGGGGCCACG GGAACAATCG GCGGCGTTGG CGCGACCGGC GCGACCGGCG CGACCGGCGC GACCGGCGCG ACCGGCGCGA CCGGCGCGAC CGGGGCCACG GGCACGACCG GCGGCGTTGG CGCAACCGGT GCGACGGGAA CAACTGGCGC AACGGGAACG ACCGGCGCTA CCGGACCAGC GGCCCATATT CCTCCTATCG TCTTCCCACC GCCTGCATTT CCACAAAAGC CGCCTCTAAA CGTGCTGCCG CCGGTGTTGC CGGGCACTTG GGTGCCCACG GTAGTGGTCG CCCCGCTGCC CCCAGAGCTT CTGACCGTCG TACCGCCGAC ACCGCCAGCC GTGCCCCCAT CCGTTATGCC GGAGTCGCCG CCAGTGGTCT TGCCGGTCGT GATACCGTCC AGGCCCTACA TGCCAACCAA GCGCCTGCCT AAACAGGAAC GCAACTAG
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Protein sequence | MNHIHRSIWN DQTGTFVAVS ENTRSAGKKI SSCASAAGGG AHFGLKTLAV CLMLACGAGV HAQPTGGVVS AGSATIGGTP GAMTITQTTP NVAINWQSFG IRAGESVQFV QPGSNSVALN RVVGADPSSI LGSLSSNGKV FLVNPNGILF GQGASVNVGG LVASTLAISD ANFMARNYQF SGAGTGSVVN QGAINAASGG YVALLGANVS NQGVIAAQLG TVALAAGNAV TLDVAGDKLL SVTVDQGAVN ALVDNGGLLR ADGGQVLMTT QAAGSLLSNA VNNTGVVQAQ TLQNVNGTIK LLGGMENGTV SAGGTLDASG TGAGQTGGSV TVTGHHAGLF GGQVNASGDA GGGTVLIGGD YQGKNPAVQN AAATYMSADA SIRADAITSG NGGKVVLWGN DSTRAYGSIT ARGGAQGGNG GLIETSGHAL DVAGIQINAS AANGLAGLWL LDPADVTITN AATSGGTLTG NVFTPNPSAS TANVNVADIV TALTAGTNVT ITTANTSGAG NGDITVDTPI TWTKTPGALP VSTLTLNAVQ DVIVNEAITA TWGSLVTTAG RDVTLFAPVT TTNGSFTANA GRDVNLVNNA AHPLTAITTT DGNFRANAGG NVNVETVALT TTRGNLILVA GIDGNTSGSV VFAAGTPVAA VTGPNAAVMI YNPIGTPPTD YSGNFTLTSG ATLTSGVFLP GIPGATGATG GVGATGATGA TGTTGATGGV GATGTTGATG TTGGVGATGA TGATGTTGGV GATGATGATG TTGGVGATGT TGATGTTGGV GATGATGATG TTGGVGATGT TGATGTTGGV GATGATGATG TTGGVGATGA TGATGTTGGV GATGATGATG TTGGVGATGA TGATGTTGGV GATGATGATG TTGGVGATGA TGATGTTGGV GATGATGATG TTGGVGATGA TGATGTTGGV GATGATGATG ATGTTGGVGA TGATGATGAT GTIGGVGATG ATGATGATGA TGATGATGAT GTTGGVGATG ATGTTGATGT TGATGPAAHI PPIVFPPPAF PQKPPLNVLP PVLPGTWVPT VVVAPLPPEL LTVVPPTPPA VPPSVMPESP PVVLPVVIPS RPYMPTKRLP KQERN
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