Gene Pnap_3701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3701 
SymbolargS 
ID4688689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3939548 
End bp3941224 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content66% 
IMG OID639836719 
Productarginyl-tRNA synthetase 
Protein accessionYP_983918 
Protein GI121606589 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0018] Arginyl-tRNA synthetase 
TIGRFAM ID[TIGR00456] arginyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.70256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCGA TTAAAAAAGA CCTGCTCTCC GCCCTGGCTA TCGCGCTGGA ACAACTCTCT 
CCCGGCGCTG GCGACAAAGC CGCCTTCGAG TCGCCCAAAG TCGCCGCCCA TGGCGACTTC
GCCTGCACCG CTGCCATGCA GCTGGCCAAG CCGCTCAAAC AAAACCCGCG CCAGACGGCC
GAAAGCCTGC GCGCGCGGCT GCTGCTGGCC CCGGCCTTCG AGCGCTGGGT CGAGGCTATT
GAAATCGCCG GCCCGGGCTT CATCAACATC CGCCTCAAGC CCGCCGCCAA GCAGGAAACC
GTTCGCGAGG TGCTGCAGGC CGGCGCGCAA TACGGAACCC AGCCCACCGA CCACGAGCGC
AAGATGATCG TCGAGTTCGT CTCGGCCAAC CCGACCGGCC CGCTGCATGT CGGCCACGGC
CGGCAGGCGG CGCTGGGGGA CGCGATCTGC AACCTCCACG CCACGCAGGG ACTTGATGTC
TGGCGCGAGT TCTACTACAA CGACGCCGGC GTGCAGATCC ACACCCTGGC CACCAGCACG
CAGGCGCGCG CCAAGGGCCT GAAGCCCGGC GACGCCAACT GGCCCGAGCC GGCCTACAAC
GGCGACTACA TCGACGACAT CGCGCGCGAT TTCCTCGCCA AAAAGACCGT CAAGTCCGAC
GACCGCGAGT TCACCGCCTC AGGCGATGTC GAAGACATGG AAGCCATCCG CCAGTTCGCC
GTGGCTTATT TGCGCCACGA GCAGGACCTG GACCTGAAGG CGTTTTCCGT CAAGTTCGAC
AACTACTACC TCGAATCGAG CCTGTACAGC TCGGGCCGCG TCGAGTCCAC GGTGCAGCGG
CTCAAGGACG CCGGCAAGAC CTACGAGCAG GACGGCGCGC TCTGGCTCAG ATCGACCGAC
TACGGCGACG ACAAAGACCG CGTCATGAAA AAGAGCGACG GCACGTTCAC CTATTTCGTT
CCCGACGTGG CCTACCACCT GGCCAAGTGG GAGCGCGGCT TTACCAAGGC GGTCAACATC
CAGGGCATGG ACCACCACGG CACCATCGCC CGGGTGCGCG CCGGCCTGCA GGCGGCCAAC
GCCGGCATTC CGGCCGGCTA CCCCGACTAT GTGCTGCACA CCATGGTGCG CGTCGTGCGC
CACGGCGAGG AAGTGAAGAT TTCCAAGCGC GCCGGCAGCT ACGTCACGCT GCGCGACCTG
ATCGAATGGA CCAGCGCCGA CGCGGTGCGC TTCTTTTTGC TCAGCCGCAA GCCCGACACC
GAATACATCT TTGACATCGA CCTGGCGCTG GCCAAGAACA ACGAGAACCC GGTGTACTAC
GTGCAGTACG CGCATGCGCG CATCTGCTCC ATCCTGACCG CCTGGGGCGG CGATGAAAGC
CAGTTCGGGC ATGTGGACCT GTCGCCGCTG GCCAGCCCGC AGGCGCAGGC GCTGATGCTG
CTGCTGGCCA AGTACACCGA CATGCTCAGC CATGCGGCCG CCGGCTTTGC GCCGCACGAC
GTGGCGTTTT ACCTGCGCGA GCTGGCCGCC TGCTACCACA GCTACTACGA CGCGGAGCGC
ATCCTGGTCG ATGACGAGGC GGTCAAACTC GCGCGCCTGG CGCTGGTCGC GGCCACCGCG
CAGGTGTTGC ACAATGGCCT CGCGGTGCTG GGCGTCAGTG CGCCGCGCAA GATGTAG
 
Protein sequence
MLSIKKDLLS ALAIALEQLS PGAGDKAAFE SPKVAAHGDF ACTAAMQLAK PLKQNPRQTA 
ESLRARLLLA PAFERWVEAI EIAGPGFINI RLKPAAKQET VREVLQAGAQ YGTQPTDHER
KMIVEFVSAN PTGPLHVGHG RQAALGDAIC NLHATQGLDV WREFYYNDAG VQIHTLATST
QARAKGLKPG DANWPEPAYN GDYIDDIARD FLAKKTVKSD DREFTASGDV EDMEAIRQFA
VAYLRHEQDL DLKAFSVKFD NYYLESSLYS SGRVESTVQR LKDAGKTYEQ DGALWLRSTD
YGDDKDRVMK KSDGTFTYFV PDVAYHLAKW ERGFTKAVNI QGMDHHGTIA RVRAGLQAAN
AGIPAGYPDY VLHTMVRVVR HGEEVKISKR AGSYVTLRDL IEWTSADAVR FFLLSRKPDT
EYIFDIDLAL AKNNENPVYY VQYAHARICS ILTAWGGDES QFGHVDLSPL ASPQAQALML
LLAKYTDMLS HAAAGFAPHD VAFYLRELAA CYHSYYDAER ILVDDEAVKL ARLALVAATA
QVLHNGLAVL GVSAPRKM