Gene Pnap_3690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3690 
Symbol 
ID4686217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3929003 
End bp3930190 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content63% 
IMG OID639836708 
Productmaltoporin precursor 
Protein accessionYP_983907 
Protein GI121606578 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4580] Maltoporin (phage lambda and maltose receptor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAA CACACAAAAT CAGCCTCATC GCAGCCGCTG CAGCCCTGTG CGCAGGCAGC 
GCATTCGCCA TGGATGTGGG CGGCATTGAG TTCCACGGCT ACTCCCGTGG CGGCCCGGTG
CTGAGCCATG ACGACAACAT CAAGGGCGGA CTGAGCCTGG GCGGCGACTT GCAGAAGTAC
CGCCTCGGCA ACGAAGGCGA CAACGGCATC GAGATCGACC TGATCAAGAA CTTCGAAGCG
GGCGGCGTGA AATGGAAGGT GCACTACATG CCCGTCAAGT GGGGCAGCAG CTCGGTCGGC
ACCGACCAGG CCTACGTGGA AATGAGCGGC CTGTCGTTTG CCCCCGAAGC CAAGGTCTGG
GCCGGGCAGC GCCGGCTGCG GATTCAGGAC GTGCACATCG TTGACAACTT CCTGCTGAAC
TACGGCGACA ACCAGGGCGC CGGCGTGACC GACATCGGCA TTGGCGGCGC CAAGCTCGGC
GTCGGCCTGT TCAGCGGTGA CAAGTTCGAC AGCTCAATGC CCGCCGGCGT GAAGGCCACC
CGCCTGAATG TGGACATTTC CGCCATCAAC ACCAACCCCG ATGGCAAGCT GCGCGTGTTG
CTGACCACGG TCAAAGGCAG CGGCCTGGCC AACAGCAACT CCGGCTCCGG CATCTCGGTG
TCGCACAACC AGGAAAACTT CCTGGTCAAG GGCATGACCA ACTCGCTGTT CCTGCAAACA
TCGACGGGAC ACGCCCGCAT TGATGGCGAG TTCCAGTCCA TCGACGGCGT GACGGCCGGC
CAGCGTGTGA GCCGCATTGC GGATTCGCTG AACTGGCAAA GCGGCGCTTT TGGCGGCCAG
ACCCTGCTGA GCTACCAGAC CAGCAAGGTG GACGGCACCA GCGTGACGAC CAAGGACACC
TCGGTGGGCG GCCGCGTGTC GTATGCCTTT TCCAGCAACT TCAAGCTGCT GGCCGAAGTG
GGCCTGACCA GCCGCAAGGC GCCCACCGGC AACCAGACGC TCAACAAGGT CACCATCGCG
CCGACCATCT CGGTGGGACC GGACTTCTGG AGCCGCCCTG AAGTGCGTTT GTATGTGACC
AAGGCCAACT GGAACACCGC AGCGGCAACA GCCAACGCCA GCACCTTCGG CGCCGGGGGC
AGAACCTCCA GCACCATCAT GGGTGTGCAG TACGAGGTGT GGTGGTAA
 
Protein sequence
MKTTHKISLI AAAAALCAGS AFAMDVGGIE FHGYSRGGPV LSHDDNIKGG LSLGGDLQKY 
RLGNEGDNGI EIDLIKNFEA GGVKWKVHYM PVKWGSSSVG TDQAYVEMSG LSFAPEAKVW
AGQRRLRIQD VHIVDNFLLN YGDNQGAGVT DIGIGGAKLG VGLFSGDKFD SSMPAGVKAT
RLNVDISAIN TNPDGKLRVL LTTVKGSGLA NSNSGSGISV SHNQENFLVK GMTNSLFLQT
STGHARIDGE FQSIDGVTAG QRVSRIADSL NWQSGAFGGQ TLLSYQTSKV DGTSVTTKDT
SVGGRVSYAF SSNFKLLAEV GLTSRKAPTG NQTLNKVTIA PTISVGPDFW SRPEVRLYVT
KANWNTAAAT ANASTFGAGG RTSSTIMGVQ YEVWW