| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3686 |
|---|
| Symbol | |
|---|
| ID | 4686106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 3924324 |
|---|
| End bp | 3925019 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639836704 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_983903 |
|---|
| Protein GI | 121606574 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCATC TACTGATTAT TGAAGACGAC GACCTGCTGC GCGACGGCTT GACCGACCTG
CTCAAGCAAA CCGGACATAC CGTGTGCAAC AGCGCGGACG GCCTGGCCGC GCAGACCTTG
CTCAACGAAC AGGTCATTGA TGCGGTGCTG CTGGACCTGG GCCTGCCCAG GCTCGACGGC
ATGTCCTTGC TGCGCTGGAT TCGCCAGCGT TTTGAAAGCC TGCCGGTGAT GATCCTGACC
GCCCGCGACG GCGTGAATGA CCGCGTGGAG GGCTTGCTCG AAGGCGCCGA CGACTACCTC
ACCAAGCCCT TCAACAACGC CGAACTCAGC GCCCGCGTGC AGGCGCTGTT GCGCCGCGCC
AGGCTGCCGG CCTTCAATAC CGAGACCCGG GCCATCACCA CGCCAGACGC CACGCAATGC
CTGCAGATTG ACAGCCAGCT GCCGCGCGCC TGGATTTTCG GCCAGGTCCA CGACCTGACG
CAGCGCGAGT GGGAGTTGCT GACCTTGCTG CACCAGCGCC TGAACCAGGT GGTCAGCCGC
GAGGACGTGG CCGCTGTCTG GCAACACGAA TCGGCCGAAC CCACCGCATC CAACGCGCTG
GAGGTGTACA TCCACCGCTT GCGCCGAAAA CTGCTGGGCT CGGGCCTGAA CATTCGCAAT
GTTCGCGGAC TGGGCTACAT GCTCGAACCC CTGTGA
|
|---|
| Protein sequence | MAHLLIIEDD DLLRDGLTDL LKQTGHTVCN SADGLAAQTL LNEQVIDAVL LDLGLPRLDG
MSLLRWIRQR FESLPVMILT ARDGVNDRVE GLLEGADDYL TKPFNNAELS ARVQALLRRA
RLPAFNTETR AITTPDATQC LQIDSQLPRA WIFGQVHDLT QREWELLTLL HQRLNQVVSR
EDVAAVWQHE SAEPTASNAL EVYIHRLRRK LLGSGLNIRN VRGLGYMLEP L
|
|---|
| |