Gene Pnap_3682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3682 
Symbol 
ID4689021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3918230 
End bp3918634 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content64% 
IMG OID639836700 
ProductPilT domain-containing protein 
Protein accessionYP_983899 
Protein GI121606570 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.362926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTACA TGCTCGACAC CAACATTTGC ATCTACCTGA CCAGGCACCA CCCGCCGCAA 
GTGCTCAAAC GGCTGGAAGC CCTGGCCCAA GGCAGCGCGG TGATGTCGGT GGTCACTTAT
GCCGAGTTGC GCGCCGGGCT GGAGATTCAA ACGGCCAACC GTCAACAGGA TGAACGTGTG
CTCGCACTGC TGATAAGCCG GATTCCGGTG CTGCCATTCA CCGCATCCGA TGCCGAGAGT
TTTGGCCGGC TTCGCGCCGC CGTGCGCGAC CGCCGCCGCG ACGCCATGGA CCGCCTGATT
GCCGCGCATG CGGTGAGCGT CGGTGTCACC CTCGTCACCA ACAACGAGGC CGATTTCAAC
GGCTACCCTG GCCTGGTGGT CGAAAACTGG GCGCGCGCCG CTTGA
 
Protein sequence
MRYMLDTNIC IYLTRHHPPQ VLKRLEALAQ GSAVMSVVTY AELRAGLEIQ TANRQQDERV 
LALLISRIPV LPFTASDAES FGRLRAAVRD RRRDAMDRLI AAHAVSVGVT LVTNNEADFN
GYPGLVVENW ARAA