Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3682 |
Symbol | |
ID | 4689021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3918230 |
End bp | 3918634 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639836700 |
Product | PilT domain-containing protein |
Protein accession | YP_983899 |
Protein GI | 121606570 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.362926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTACA TGCTCGACAC CAACATTTGC ATCTACCTGA CCAGGCACCA CCCGCCGCAA GTGCTCAAAC GGCTGGAAGC CCTGGCCCAA GGCAGCGCGG TGATGTCGGT GGTCACTTAT GCCGAGTTGC GCGCCGGGCT GGAGATTCAA ACGGCCAACC GTCAACAGGA TGAACGTGTG CTCGCACTGC TGATAAGCCG GATTCCGGTG CTGCCATTCA CCGCATCCGA TGCCGAGAGT TTTGGCCGGC TTCGCGCCGC CGTGCGCGAC CGCCGCCGCG ACGCCATGGA CCGCCTGATT GCCGCGCATG CGGTGAGCGT CGGTGTCACC CTCGTCACCA ACAACGAGGC CGATTTCAAC GGCTACCCTG GCCTGGTGGT CGAAAACTGG GCGCGCGCCG CTTGA
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Protein sequence | MRYMLDTNIC IYLTRHHPPQ VLKRLEALAQ GSAVMSVVTY AELRAGLEIQ TANRQQDERV LALLISRIPV LPFTASDAES FGRLRAAVRD RRRDAMDRLI AAHAVSVGVT LVTNNEADFN GYPGLVVENW ARAA
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